Structure Database (LMSD)
Common Name
cis-dec-2-enoic acid
Systematic Name
2Z-decenoic acid
Synonyms
- (Z)-dec-2-enoic acid
- C10:1n-8
3D model of cis-dec-2-enoic acid
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
Biological Context
cis-2-Decenoic acid is an unsaturated short chain fatty acid that is secreted by P. aeruginosa and induces a dispersion response in biofilms formed by gram-negative and gram-positive bacteria, as well as by the yeast C. albicans.1 It effectively promotes dispersion of P. aeruginosa biofilms over a concentration range of 1.0 to 10 nM.1
This information has been provided by Cayman Chemical
References
1. Davies, D.G., and Marques, C.N.H. A fatty acid messenger is responsible for inducing dispersion in microbial biofilms. J. Bacteriol. 191(5), 1393-1403 (2009).
Reactions
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References
Taxonomy Information
Curated from
NCBI taxonomy class
Reference
Pseudomonas aeruginosa
(#287)
Gammaproteobacteria
(#1236)
A fatty acid messenger is responsible for inducing dispersion in microbial biofilms.,
J. Bacteriol, 2009
J. Bacteriol, 2009
Pubmed ID:
19074399
DOI:
10.1128/JB.01214-08
String Representations
InChiKey (Click to copy)
WXBXVVIUZANZAU-HJWRWDBZSA-N
InChi (Click to copy)
InChI=1S/C10H18O2/c1-2-3-4-5-6-7-8-9-10(11)12/h8-9H,2-7H2,1H3,(H,11,12)/b9-8-
SMILES (Click to copy)
O=C(O)/C=C\CCCCCCC
Other Databases
Calculated Physicochemical Properties
Heavy Atoms
12
Rings
0
Aromatic Rings
0
Rotatable Bonds
7
Van der Waals Molecular Volume
193.86
Topological Polar Surface Area
37.30
Hydrogen Bond Donors
1
Hydrogen Bond Acceptors
2
logP
2.99
Molar Refractivity
50.15
Admin
Created at
-
Updated at
25th Apr 2022