Structure Database (LMSD)

Common Name
PGF2alpha alcohol
Systematic Name
1,9S,11R,15S-tetrahydroxy-5Z,13E-prostadiene
Synonyms
  • Prostaglandin F2alpha alcohol
LM ID
LMFA03010113
Formula
Exact Mass
Calculate m/z
340.26136
Sum Composition
Status
Curated

Classification

Biological Context

Prostaglandin F2α alcohol (PGF2α-OH) is an analog of PGF2α in which the C-1 carboxyl group has been reduced to a primary alcohol. Biological studies on rat uterus show it to be a weak agonist.1 The compound is reported to retain ocular hypotensive properties,2 but the nature of the receptors which mediate these effects is disputed.3

This information has been provided by Cayman Chemical

References

1. Woodward, D.F., and Chan, M.F. Preparation of PGF-1 alcohols as ocular hypotensives. 38204, 1-12 (1993).
2. Brambaifa, N. Luteolytic potency of PGD and PGF2α derivatives. Eur. J. Obstet. Gynecol. Reprod. Biol. 27(4), 319-325 (1988).

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
synthetic construct (#32630)
Replacement of the carboxylic acid group of prostaglandin f(2alpha) with a hydroxyl or methoxy substituent provides biologically unique compounds.,
Br J Pharmacol, 2000
Pubmed ID: 10952685

String Representations

InChiKey (Click to copy)
QYBXRFWLQYXAPC-LFZNYWNYSA-N
InChi (Click to copy)
InChI=1S/C20H36O4/c1-2-3-7-10-16(22)12-13-18-17(19(23)15-20(18)24)11-8-5-4-6-9-14-21/h5,8,12-13,16-24H,2-4,6-7,9-11,14-15H2,1H3/b8-5-,13-12+/t16-,17+,18+,19-,20+/m0/s1
SMILES (Click to copy)
[C@H]1(/C=C/[C@@H](O)CCCCC)[C@H](O)C[C@H](O)[C@@H]1C/C=C\CCCCO

Other Databases

CHEBI ID
LIPIDBANK ID
XPR1783
PubChem CID
Cayman ID

Calculated Physicochemical Properties

Heavy Atoms 24
Rings 1
Aromatic Rings 0
Rotatable Bonds 12
Van der Waals Molecular Volume 372.08
Topological Polar Surface Area 80.92
Hydrogen Bond Donors 4
Hydrogen Bond Acceptors 4
logP 4.09
Molar Refractivity 99.62

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Created at
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Updated at
21st Apr 2022