Structure Database (LMSD)
Common Name
2'-(5''-phosphoribosyl)-3'-dephospho-CoA
Systematic Name
2'-(5-phospho-D-ribofuranosyl)adenosine 5'-{3-[(3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-({3-oxo-3-[(2-sulfanylethyl)amino]propyl}amino)butyl] dihydrogen diphosphate}
Synonyms
3D model of 2'-(5''-phosphoribosyl)-3'-dephospho-CoA
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Main
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
QPIDRKLSWXSKDV-JIRKQKIOSA-N
InChi (Click to copy)
InChI=1S/C26H44N7O20P3S/c1-26(2,20(38)23(39)29-4-3-14(34)28-5-6-57)9-49-56(45,46)53-55(43,44)48-8-13-17(36)19(24(50-13)33-11-32-15-21(27)30-10-31-22(15)33)52-25-18(37)16(35)12(51-25)7-47-54(40,41)42/h10-13,16-20,24-25,35-38,57H,3-9H2,1-2H3,(H,28,34)(H,29,39)(H,43,44)(H,45,46)(H2,27,30,31)(H2,40,41,42)/t12-,13-,16-,17-,18-,19-,20+,24-,25+/m1/s1
SMILES (Click to copy)
O1[C@H](COP(=O)(O)O)[C@@H](O)[C@@H](O)[C@@H]1O[C@@H]1[C@H](O)[C@@H](COP(O)(=O)OP(O)(=O)OCC(C)([C@@H](O)C(=O)NCCC(=O)NCCS)C)O[C@H]1N1C=NC2C(N)=NC=NC1=2
References
Calculated Physicochemical Properties
Heavy Atoms
57
Rings
4
Aromatic Rings
2
Rotatable Bonds
21
Van der Waals Molecular Volume
702.08
Topological Polar Surface Area
409.62
Hydrogen Bond Donors
11
Hydrogen Bond Acceptors
24
logP
1.48
Molar Refractivity
196.60
Reactions
Filter by species:
ⓘ
Reactions are shown if the E.C. number of the enzyme catalysing it is annotated in the UniProt database for a species belonging to the selected taxonomic class.
Click on an edge to display the reaction(s).
Admin
Created at
-
Updated at
25th Apr 2022