Structure Database (LMSD)
Common Name
GalNAc-GM1b(d18:1/26:1(17Z))
Systematic Name
GalNAcβ1-4(NeuAcα2-3)Galβ1-3GalNAcβ1-4Galβ1-4Glcβ-Cer(d18:1/26:1(17Z))
Synonyms
LM ID
LMSP0601AZ08
Formula
Exact Mass
Calculate m/z
1859.065586
Sum Composition
Status
Active (generated by computational methods)
3D model of GalNAc-GM1b(d18:1/26:1(17Z))
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Main
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
YVKYBFOYPZTSIT-JWOLQROMSA-N
InChi (Click to copy)
InChI=1S/C89H158N4O36/c1-6-8-10-12-14-16-18-20-21-22-23-24-25-26-27-28-29-31-33-35-37-39-41-43-64(106)93-55(56(103)42-40-38-36-34-32-30-19-17-15-13-11-9-7-2)51-118-85-74(113)72(111)78(61(48-97)121-85)125-86-75(114)73(112)77(62(49-98)122-86)124-84-67(92-54(5)102)80(70(109)60(47-96)120-84)127-87-76(115)82(79(63(50-99)123-87)126-83-66(91-53(4)101)71(110)69(108)59(46-95)119-83)129-89(88(116)117)44-57(104)65(90-52(3)100)81(128-89)68(107)58(105)45-94/h20-21,40,42,55-63,65-87,94-99,103-105,107-115H,6-19,22-39,41,43-51H2,1-5H3,(H,90,100)(H,91,101)(H,92,102)(H,93,106)(H,116,117)/b21-20-,42-40+/t55-,56+,57-,58+,59+,60+,61+,62+,63+,65+,66+,67+,68+,69-,70-,71+,72+,73+,74+,75+,76+,77-,78+,79-,80+,81+,82+,83-,84-,85+,86-,87-,89-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O[C@@H]5O[C@H](CO)[C@H](O)[C@H](O)[C@H]5NC(=O)C)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCC/C=C\CCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
References
Calculated Physicochemical Properties
Heavy Atoms
129
Rings
6
Aromatic Rings
0
Rotatable Bonds
63
Van der Waals Molecular Volume
1816.06
Topological Polar Surface Area
641.02
Hydrogen Bond Donors
23
Hydrogen Bond Acceptors
36
logP
11.27
Molar Refractivity
479.75
Admin
Created at
-
Updated at
26th Jul 2021