Common Name
LM ID
Instrument
Adduct / Ion
Submitter
PGF3alpha
Thermo Scientific Orbitrap Exploris 240
[M-H]-
Fedorova Lab (LMAI) - Gabriele Lombardi Bendoula
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Structure
Common name
PGF3alpha
LMID
Systematic name
9S,11R,15S-trihydroxy-5Z,13E,17Z-prostatrienoic acid
m/z
351.2177
Adduct / Ion
[M-H]-
Charge
-1
Ion source
HESI
Instrument
Thermo Scientific Orbitrap Exploris 240
Resolution
30000
For high resolution data only
Ion mode
Negative
Collision Energy (CE)
40,50,60
Column
Accucore C30 150 x 2.1
Mobile phase A
Acetonitrile:water 50/50 v/v 5mM AmFm + 0.1% FA
Mobile phase B
Isopropanol:Acetonitrile:water 85/10/5 v/v 5mM AmFm + 0.1% FA
Retention time (min)
0.96
Amount injected
62.5 pmol
DOI for method
Date acquired
March 2025
Submitters
Fedorova Lab (LMAI) - Gabriele Lombardi Bendoula
Source of standard
Cayman Chemical
PGF3alpha
Thermo Scientific Orbitrap Exploris 240
[M-H]-
Fedorova Lab (LMAI) - Gabriele Lombardi Bendoula
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Structure
Common name
PGF3alpha
LMID
Systematic name
9S,11R,15S-trihydroxy-5Z,13E,17Z-prostatrienoic acid
m/z
351.2177
Adduct / Ion
[M-H]-
Charge
-1
Ion source
HESI
Instrument
Thermo Scientific Orbitrap Exploris 240
Resolution
30000
For high resolution data only
Ion mode
Negative
Collision Energy (CE)
17,27,37
Column
Accucore C30 150 x 2.1
Mobile phase A
Acetonitrile:water 50/50 v/v 5mM AmFm + 0.1% FA
Mobile phase B
Isopropanol:Acetonitrile:water 85/10/5 v/v 5mM AmFm + 0.1% FA
Amount injected
62.5 pmol
DOI for method
Date acquired
March 2025
Submitters
Fedorova Lab (LMAI) - Gabriele Lombardi Bendoula
Source of standard
Cayman Chemical
PGF3alpha
Thermo Scientific Orbitrap Exploris 240
[M-H]-
Fedorova Lab (LMAI) - Gabriele Lombardi Bendoula
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Structure
Common name
PGF3alpha
LMID
Systematic name
9S,11R,15S-trihydroxy-5Z,13E,17Z-prostatrienoic acid
m/z
351.2177
Adduct / Ion
[M-H]-
Charge
-1
Ion source
HESI
Instrument
Thermo Scientific Orbitrap Exploris 240
Resolution
30000
For high resolution data only
Ion mode
Negative
Collision Energy (CE)
25,33,45
Column
Accucore C30 150 x 2.1
Mobile phase A
Acetonitrile:water 50/50 v/v 5mM AmFm + 0.1% FA
Mobile phase B
Isopropanol:Acetonitrile:water 85/10/5 v/v 5mM AmFm + 0.1% FA
Amount injected
62.5 pmol
DOI for method
Date acquired
March 2025
Submitters
Fedorova Lab (LMAI) - Gabriele Lombardi Bendoula
Source of standard
Cayman Chemical
PGF3alpha
Thermo Scientific Orbitrap Exploris 240
[M-H]-
Fedorova Lab (LMAI) - Gabriele Lombardi Bendoula
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Structure
Common name
PGF3alpha
LMID
Systematic name
9S,11R,15S-trihydroxy-5Z,13E,17Z-prostatrienoic acid
m/z
351.2177
Adduct / Ion
[M-H]-
Charge
-1
Ion source
HESI
Instrument
Thermo Scientific Orbitrap Exploris 240
Resolution
30000
For high resolution data only
Ion mode
Negative
Collision Energy (CE)
35,45,55
Column
Accucore C30 150 x 2.1
Mobile phase A
Acetonitrile:water 50/50 v/v 5mM AmFm + 0.1% FA
Mobile phase B
Isopropanol:Acetonitrile:water 85/10/5 v/v 5mM AmFm + 0.1% FA
Amount injected
62.5 pmol
DOI for method
Date acquired
March 2025
Submitters
Fedorova Lab (LMAI) - Gabriele Lombardi Bendoula
Source of standard
Cayman Chemical
PGF3alpha
Thermo Fisher Orbitrap ID-X Tribrid
[M-H]-
Jean-Marie Galano.Ángel Sánchez Illana.Thierry Durand
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Structure
Common name
PGF3alpha
LMID
Systematic name
9S,11R,15S-trihydroxy-5Z,13E,17Z-prostatrienoic acid
m/z
351.2177
Adduct / Ion
[M-H]-
Charge
-1
Ion source
ESI
Instrument
Thermo Fisher Orbitrap ID-X Tribrid
Resolution
60000
For high resolution data only
Ion mode
Negative
Collision Energy (CE)
stepped HCD collision energy 20–40–60%
Column
Kinetex C18 (100 × 2.1 mm, 1.7 µm)
Mobile phase A
H2O (0.1% HCOOH)
Mobile phase B
CH3CN (0.1% HCOOH) binary gradient at 0.5 m L/min
Retention time (min)
4.55
Amount injected
10 µL
DOI for method
Date acquired
October 2023
Submitters
Jean-Marie Galano.Ángel Sánchez Illana.Thierry Durand
Source of standard
Synthesized in-house
PGF3alpha
Thermo QExactive HF
[M-H]-
N.Kampschulte, M.A.Chromik, R.Kirchhoff, A.Löwen, K.Mosel, K.Plitzko, L.Scholz, L.Wende, M.Wiebel, N.H.Schebb
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Structure
Common name
PGF3alpha
LMID
Systematic name
9S,11R,15S-trihydroxy-5Z,13E,17Z-prostatrienoic acid
m/z
351.2
Adduct / Ion
[M-H]-
Charge
-1
Ion source
HESI
Instrument
Thermo QExactive HF
Resolution
Not Available
For high resolution data only
Ion mode
Negative
Collision Energy (CE)
30
Column
Zorbax Eclipse Plus C18 reversed phase column (2.1 x 150 mm, particle size 1.8 mm; Agilent, Waldbronn, Germany)
Mobile phase A
95/5 (v/v) 0.1% acetic acid (aq)/Eluent B
Mobile phase B
800/150/1 (v/v/v) acetonitrile/methanol/acetic acid
Retention time (min)
7.83
Amount injected
~ 0.3 ng
DOI for method
Date acquired
February 2025
Submitters
N.Kampschulte, M.A.Chromik, R.Kirchhoff, A.Löwen, K.Mosel, K.Plitzko, L.Scholz, L.Wende, M.Wiebel, N.H.Schebb
Source of standard
Cayman Chemical
PGF3alpha
Sciex 5500, QqQ
[M-H]-
N.Kampschulte, M.A.Chromik, R.Kirchhoff, A.Löwen, K.Mosel, K.Plitzko, L.Scholz, L.Wende, M.Wiebel, N.H.Schebb
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Structure
Common name
PGF3alpha
LMID
Systematic name
9S,11R,15S-trihydroxy-5Z,13E,17Z-prostatrienoic acid
m/z
351.2
Adduct / Ion
[M-H]-
Charge
-1
Ion source
ESI
Instrument
Sciex 5500, QqQ
Resolution
N/A
For high resolution data only
Ion mode
Negative
Collision Energy (CE)
-15 - -25
Column
Zorbax Eclipse Plus C18 reversed phase column (2.1 x 150 mm, particle size 1.8 mm; Agilent, Waldbronn, Germany)
Mobile phase A
95/5 (v/v) 0.1% acetic acid (aq)/Eluent B
Mobile phase B
800/150/1 (v/v/v) acetonitrile/methanol/acetic acid
Retention time (min)
7.83
Amount injected
~ 0.3 ng
DOI for method
Date acquired
April 2025
Submitters
N.Kampschulte, M.A.Chromik, R.Kirchhoff, A.Löwen, K.Mosel, K.Plitzko, L.Scholz, L.Wende, M.Wiebel, N.H.Schebb
Source of standard
Cayman Chemical
PGF3alpha
Sciex 6500+/QTrap
[M-H]-
N.Kampschulte, M.A.Chromik, R.Kirchhoff, A.Löwen, K.Mosel, K.Plitzko, L.Scholz, L.Wende, M.Wiebel, N.H.Schebb
[{"mz":171.2,"intensity":8800},{"mz":191.2,"intensity":10000},{"mz":192.9,"intensity":31200},{"mz":208.8,"intensity":26000},{"mz":216.8,"intensity":15200},{"mz":218.8,"intensity":14000},{"mz":220.9,"intensity":5600},{"mz":221.2,"intensity":5600},{"mz":227.1,"intensity":5200},{"mz":235,"intensity":22000},{"mz":238.2,"intensity":9200},{"mz":245,"intensity":23600},{"mz":247.1,"intensity":3600},{"mz":253.2,"intensity":13200},{"mz":261.1,"intensity":7600},{"mz":263.2,"intensity":6000},{"mz":264.1,"intensity":4000},{"mz":268.6,"intensity":4400},{"mz":268.8,"intensity":9200},{"mz":271.1,"intensity":22800},{"mz":279.2,"intensity":11200},{"mz":289.4,"intensity":38400},{"mz":290.9,"intensity":6800},{"mz":297.4,"intensity":20000},{"mz":307,"intensity":237600},{"mz":315.1,"intensity":18000},{"mz":333.3,"intensity":42000},{"mz":351.2,"intensity":350800}]
Structure
Common name
PGF3alpha
LMID
Systematic name
9S,11R,15S-trihydroxy-5Z,13E,17Z-prostatrienoic acid
m/z
351.2
Adduct / Ion
[M-H]-
Charge
-1
Ion source
ESI
Instrument
Sciex 6500+/QTrap
Resolution
N/A
For high resolution data only
Ion mode
Negative
Collision Energy (CE)
-15 - -25
Column
Zorbax Eclipse Plus C18 reversed phase column (2.1 x 150 mm, particle size 1.8 mm; Agilent, Waldbronn, Germany)
Mobile phase A
95/5 (v/v) 0.1% acetic acid (aq)/Eluent B
Mobile phase B
800/150/1 (v/v/v) acetonitrile/methanol/acetic acid
Retention time (min)
7.83
Amount injected
~ 0.3 ng
DOI for method
Date acquired
March 2025
Submitters
N.Kampschulte, M.A.Chromik, R.Kirchhoff, A.Löwen, K.Mosel, K.Plitzko, L.Scholz, L.Wende, M.Wiebel, N.H.Schebb
Source of standard
Cayman Chemical