Metabolomics Workbench

The Metabolomics Workbench (MW), supported by the National Institutes of Health, serves as the national and international repository for metabolomics data and metadata and provides analysis tools and access to metabolite standards, protocols, tutorials, training and more. As of August 2022, the National Metabolomics Data Repository (NMDR) contains approximately 2200 MS and NMR studies, the RefMet data resource containing over 163,000 annotated metabolite species (serving as the metabolite standard reference), a curated metabolite database with over 164,000 structures, and a large suite of enhanced and web-interactive tools for analysis. In addition to options for data deposition, user access and tool interfaces and a suite of tools, the MW provides a set of minimal metadata standards. MW also provides a suite of cloud computing tools. MyBinder a free service hosts Jupyter python notebooks to retrieve and analyze data for studies on the Workbench. A total of 17 Notebooks are available.