Lipidomics studies on macrophages - Foam cell study with wild-type and LDLR(-/-) mice, normal and high-fat diets
Introduction | Browse | DownloadMouse-over the above links for more information
| Legend: |  : View data for technical replicates : Graph of technical replicates(within an expt.)
 : Graph of biological replicates(across expts.) |
|---|
| Details/Graph technical replicates | LM_ID | Name | Mass (neutral) |
WT-Fat WT-Chow KO-Fat KO-Chow |
Units . . . . | |
|---|---|---|---|---|---|---|
|
(BCJ070124) | LMSP02010004 | C16 Cer | 537.5 (ions) | 490 440 660 460 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02020001 | C16DH Cer | 539.5 (ions) | 320 230 520 290 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA04 | C16DH GlcCer | 701.6 (ions) | 81 52 110 74 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010004 | C16DH Sphingomyelin | 704.6 (ions) | 1500 1680 1780 1590 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA03 | C16 GlcCer | 699.6 (ions) | 740 770 700 720 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010003 | C16 Sphingomyelin | 702.6 (ions) | 13160 14000 13960 15070 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02010006 | C18 Cer | 565.5 (ions) | 12 13 16 16 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02020008 | C18DH Cer | 567.6 (ions) | 18 15 24 21 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA19 | C18DH GlcCer | 729.6 (ions) | - 3.8 3.8 20 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010020 | C18DH Sphingomyelin | 732.6 (ions) | 31 30 33 31 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA05 | C18 GlcCer | 727.6 (ions) | 22 21 14 23 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010001 | C18 Sphingomyelin | 730.6 (ions) | 190 190 200 200 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02010007 | C20 Cer | 593.6 (ions) | 6.2 6.4 8.8 6.9 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02020009 | C20DH Cer | 595.6 (ions) | 4.6 5.1 12 11 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA20 | C20DH GlcCer | 757.6 (ions) | 1.9 3.3 2.8 5.6 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010021 | C20DH Sphingomyelin | 760.6 (ions) | 32 34 33 40 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA06 | C20 GlcCer | 755.6 (ions) | 12 11 10 13 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010005 | C20 Sphingomyelin | 758.6 (ions) | 54 56 65 63 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02010008 | C22 Cer | 621.6 (ions) | 42 42 66 44 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02020010 | C22DH Cer | 623.6 (ions) | 20 16 36 22 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA21 | C22DH GlcCer | 785.7 (ions) | 17 13 21 6 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010022 | C22DH Sphingomyelin | 788.7 (ions) | 32 36 44 40 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA07 | C22 GlcCer | 783.7 (ions) | 120 130 130 150 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010006 | C22 Sphingomyelin | 786.7 (ions) | 350 380 430 460 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02010009 | C24:1 Cer | 647.6 (ions) | 630 630 700 630 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02020011 | C24:1DH Cer | 649.6 (ions) | 99 66 180 79 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA22 | C24:1DH GlcCer | 811.7 (ions) | 27 58 44 39 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010023 | C24:1DH Sphingomyelin | 814.7 (ions) | 690 910 870 980 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA08 | C24:1 GlcCer | 809.7 (ions) | 670 730 560 780 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010007 | C24:1 Sphingomyelin | 812.7 (ions) | 3990 4840 4250 5310 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02010012 | C24 Cer | 649.6 (ions) | 110 120 190 130 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02020012 | C24DH Cer | 651.7 (ions) | 24 15 44 30 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA23 | C24DH GlcCer | 813.7 (ions) | 47 6.9 22 3.2 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010024 | C24DH Sphingomyelin | 816.7 (ions) | 32 44 47 52 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA09 | C24 GlcCer | 811.7 (ions) | 220 260 250 350 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010008 | C24 Sphingomyelin | 814.7 (ions) | 780 960 910 1110 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02010010 | C26:1 Cer | 675.7 (ions) | 7.6 7 9.9 7.1 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02020013 | C26:1DH Cer | 677.7 (ions) | 3 2.1 3.4 3.5 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA24 | C26:1DH GlcCer | 839.7 (ions) | - 6.4 1.6 3.6 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010025 | C26:1DH Sphingomyelin | 842.7 (ions) | 3.5 5.3 3.3 6.4 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA10 | C26:1 GlcCer | 837.7 (ions) | 4.7 6.1 3.1 6.8 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010009 | C26:1 Sphingomyelin | 840.7 (ions) | 19 24 20 26 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02010011 | C26 Cer | 677.7 (ions) | 2.4 3.2 3.4 2.4 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP02020014 | C26DH Cer | 679.7 (ions) | 0.15 1.5 2.2 0.3 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA25 | C26DH GlcCer | 841.7 (ions) | 2.5 - 2.9 - |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010026 | C26DH Sphingomyelin | 844.7 (ions) | 1.1 1.9 1.6 2.4 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP0501AA11 | C26 GlcCer | 839.7 (ions) | 2.4 2.5 1.7 2.9 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP03010010 | C26 Sphingomyelin | 842.7 (ions) | 3.8 5.2 4.2 6.6 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP01020001 | Sphinganine | 301.3 (ions) | 21 15 30 16 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP01050002 | Sphinganine-P | 381.3 (ions) | 15 11 10 20 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP01010001 | Sphingosine | 299.3 (ions) | 290 220 270 280 |
pmol/1E6 cells | |
|
(BCJ070124) | LMSP01050001 | Sphingosine-P | 379.2 (ions) | 310 250 190 420 |
pmol/1E6 cells |
*:The units in the table and graphs correspond to the intensity of each species
divided by the intensity of an appropriate internal standard
(C12 analogs for Cer, GlcCer and SM; C20 analogs for So,Sa; C17 analogs for So-P and Sa-P).
The amount of internal standard added to each sample in the time series and control experiments was identical.
The relative intensity values were converted to pmoles and then normalized to the measured quantity of DNA present
in each RAW cell preparation following treatment with and without Kdo2 lipid A for each time point.