Lipidomics studies on macrophages - RAW 264.7 cells treated with Kdo2-Lipid A

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Sterol Lipids (ST)

Display Time Course Plots for Selected Analytes

Legendgraph_icon: View data/graphs for technical replicates
graph icon: Graph of biological replicates(across expts.)
Details/Graph
Name Kdo
Ctl
0min
Kdo
Ctl
30min
Kdo
Ctl
1hr
Kdo
Ctl
2hrs
Kdo
Ctl
4hrs
Kdo
Ctl
8hrs
Kdo
Ctl
12hrs
Kdo
Ctl
24hrs

Units
. . . .
 details icon   graph icon22R-hydroxy-cholesterol-
0.00
0.00
0.00
0.00
0.00
0.00
0.00
0.00
0.00
0.00
0.00
0.00
0.00
0.00
0.00
pmol/ug DNA
 details icon   graph icon24,25-epoxy-cholesterol-
0.55
0.60
0.55
0.54
0.52
0.65
0.59
0.76
0.65
1.08
0.77
1.49
0.77
2.56
1.30
pmol/ug DNA
 details icon   graph icon25-hydroxy-cholesterol-
0.09
0.05
0.04
0.04
0.04
0.05
0.04
0.09
0.04
0.12
0.05
0.15
0.06
0.25
0.08
pmol/ug DNA
 details icon   graph icon27-hydroxy-cholesterol-
0.08
0.10
0.09
0.09
0.11
0.13
0.10
0.09
0.09
0.17
0.12
0.18
0.12
0.22
0.19
pmol/ug DNA
 details icon   graph icon4beta-hydroxy-cholesterol-
0.04
0.04
0.04
0.04
0.03
0.04
0.03
0.05
0.04
0.04
0.03
0.04
0.03
0.08
0.04
pmol/ug DNA
 details icon   graph icon7alpha-hydroxy-cholesterol-
0.53
0.45
0.46
0.44
0.38
0.63
0.46
0.40
0.37
0.62
0.47
0.50
0.38
0.81
0.42
pmol/ug DNA
 details icon   graph icon7-Dehydrocholesterol-
6.27
6.51
6.28
5.68
5.37
6.81
6.22
7.47
5.30
13.09
5.51
11.70
4.08
5.83
2.72
pmol/ug DNA
 details icon   graph icon7-oxo-cholesterol-
1.52
1.49
1.37
1.50
1.42
1.59
1.47
1.72
1.56
1.89
1.43
2.15
1.28
3.18
1.43
pmol/ug DNA
 details icon   graph iconCholestenone-
2.27
1.92
1.77
1.67
1.48
1.96
1.88
1.57
1.68
2.41
2.05
3.00
2.05
4.48
2.09
pmol/ug DNA
 details icon   graph iconCholesterol-
866.54
856.91
827.24
865.32
834.74
917.09
861.92
1016.20
885.89
1190.17
910.58
1377.19
884.22
2085.61
1148.62
pmol/ug DNA
 details icon   graph iconDesmosterol-
11.46
12.40
12.14
14.20
14.01
14.82
13.32
18.03
15.20
28.48
16.26
51.42
19.01
104.92
33.38
pmol/ug DNA
 details icon   graph iconLanosterol-
3.85
3.56
3.40
3.14
3.23
2.78
2.93
3.68
2.97
15.00
3.31
66.79
4.48
209.67
6.74
pmol/ug DNA
 details icon   graph iconDNA-
37.95
41.53
44.55
38.67
43.20
39.08
43.21
39.85
42.24
44.70
58.04
51.63
72.25
43.49
96.53
ug/sample
 details icon   graph iconTNF-
55.33
140.11
65.11
1712.33
72.22
3891.89
79.67
17362.56
91.56
33560.00
133.78
40771.89
172.22
48175.78
241.56
pg/ml


 

*: The units in the table and graphs correspond to the pmol of each species which was determined by dividing the areas under the LC MS/MS elution curve for each species by that for an appropriate deuterated surrogate standard then multiplied by the amount of the surrogate standard added (~10 pmol to 2 nmol depending on the compound of interest). For most of the analytes, the intensities were similiar for equivalent amounts of the analyte as for the internal standard when the LC MS/MS parameters were optimized and quantitative analysis was conducted by Multiple Reaction Monitoring (MRM). If necessary, small corrections were made using empirically determined relative response factors (RRF). The pmoles were then normalized to the measured quantity of DNA present in each sample (i.e. dish of RAW cells at time zero or at varying times following treatment with and without Kdo2 lipid A).