Lipidomics studies on macrophages - Foam cell study with wild-type and LDLR(-/-) mice, normal and high-fat diets

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Legend:graph_icon: View data for technical replicates
graph icon: Graph of technical replicates(within an expt.) graph icon: Graph of biological replicates(across expts.)
Details/Graph
technical replicates
LM_ID NameMass
(neutral)
WT-Fat
WT-Chow
KO-Fat
KO-Chow
Units
. . . .
(MSE070712)LMST01020004 CE(14:0)596.6 (ions) 15
0.47
93
3.3
pmol/10E6 cells
(MSE070712)LMST01020021 CE(14:1)594.5 (ions) 9.6
0.3
29
0.6
pmol/10E6 cells
(MSE070712)LMST01020005 CE(16:0)624.6 (ions) 180
17
400
110
pmol/10E6 cells
(MSE070712)LMST01020006 CE(16:1)622.6 (ions) 120
3.6
270
50
pmol/10E6 cells
(MSE070712)LMST01020024 CE(16:2)620.6 (ions) 34
0.47
75
9.7
pmol/10E6 cells
(MSE070712)LMST01020007 CE(18:0)652.6 (ions) 84
6.5
170
62
pmol/10E6 cells
(MSE070712)LMST01020003 CE(18:1)650.6 (ions) 1340
39
2350
780
pmol/10E6 cells
(MSE070712)LMST01020008 CE(18:2)648.6 (ions) 150
7
290
210
pmol/10E6 cells
(MSE070712)LMST01020010 CE(20:0)680.6 (ions) 13
0.77
10
6.6
pmol/10E6 cells
(MSE070712)LMST01020011 CE(20:1)678.6 (ions) 21
0.83
23
13
pmol/10E6 cells
(MSE070712)LMST01020012 CE(20:2)676.6 (ions) 24
2.3
40
26
pmol/10E6 cells
(MSE070712)LMST01020014 CE(20:4)672.6 (ions) 180
5.5
230
390
pmol/10E6 cells
(MSE070712)LMST01020025 CE(22:1)706.7 (ions) 12
0.43
16
7.6
pmol/10E6 cells
(MSE070712)LMST01020019 CE(22:6)696.6 (ions) 140
3
310
140
pmol/10E6 cells

 


*: In HPLC/MS/MS measurements by multiple reaction monitoring, the response ratio for each analyte was determined relative to a known amount of internal standard (400 pmol of 13C18 (18:1) cholesterol ester) that was added to each biological and calibration sample. The absolute amount of each analyte in a sample was then calculated by comparison to a standard curve for a given analyte. Specific six point calibration curves from 0.0 to 1.6 nmoles were constructed for each set of samples for the following cholesterol esters: 14:0, 16:0, 16:1, 18:0, 18:1, 18:2, 20:0, 20:1, 20:2, 20:3, 20:4, and 22:6. Analytes for which no direct reference standard was available were determined based on the curve for a standard closest in number of carbon atoms and double bonds. The value reported in the table was finally adjusted for the amount of DNA measured for each sample.