LIPID MAPS Annual Meeting 2012:
Lipidomics Impact on Cell Biology, Metabolomics and Translational Medicine
May 7-8, 2012, La Jolla, CA

Meeting Overview | Program | Speakers | Posters | Bioinformatics Demo | Travel and Lodging | Registration | Meeting Support | Contact | Photos

Bioinformatics Demonstration

In addition to posters presented by meeting attendees, several posters describing LIPID MAPS tools, databases, and other resources will be available for viewing. Personnel from the LIPID MAPS Bioinformatics Core will be available for hands-on demonstrations and to answer user questions. The Bioinformatics Demonstration will coincide with the poster session.

Lipids, genes, and pathways data across timecourse experiments for bone-marrow derived macrophages treated with ATP and Kdo₂-lipid A
Manish Sud^a, Eoin Fahy^a, Dawn Cotter^a, Robert Byrnes^a, Shakti Gupta^a, Sean Li^a , Mano Maurya^a, Shankar Subramaniam^a,b, H. Alex Brown^c, Christopher K. Glass^d, Alfred H. Merrill, Jr.^e, Robert C. Murphy^f, Christian R.H. Raetz^g, David W. Russell^h, Edward A. Dennisⁱ

 

Lipids, genes, and pathways data across timecourse experiments for RAW 264.7 cells treated with Compactin and Kdo2-lipid A
Manish Sud^a, Eoin Fahy^a, Dawn Cotter^a, Robert Byrnes^a, Shakti Gupta^a, Sean Li^a , Mano Maurya^a, Shankar Subramaniam^a,b, H. Alex Brown^c, Christopher K. Glass^d, Alfred H. Merrill, Jr.^e, Robert C. Murphy^f, Christian R.H. Raetz^g, David W. Russell^h, Edward A. Dennisⁱ

 

Lipids, genes, and pathways data across timecourse experiments for thioglycolate-elicited peritoneal macrophages treated with Compactin and Kdo2-lipid A
Manish Sud^a, Eoin Fahy^a, Dawn Cotter^a, Robert Byrnes^a, Shakti Gupta^a, Sean Li^a , Mano Maurya^a, Shankar Subramaniam^a,b, H. Alex Brown^c, Christopher K. Glass^d, Alfred H. Merrill, Jr.^e, Robert C. Murphy^f, Christian R.H. Raetz^g, David W. Russell^h, Edward A. Dennisⁱ

 

LIPID MAPS methodologies for pathway construction and analysis
Robert Byrnes^a, Dawn Cotter^a, Eoin Fahy^a, Shakti Gupta^a, Sean Li^a , Mano Maurya^a, Manish Sud^a, Shankar Subramaniam^a,b aLIPID MAPS Bioinformatics Core, SDSC, UCSD, 9500 Gilman Dr, La Jolla, CA 92093; bDepartment of Bioengineering, UCSD, 9500, Gilman Dr, La Jolla, CA, 92093.

 

Searching the LIPID MAPS databases
Dawn Cotter^a, Eoin Fahy^a, Manish Sud^a, Shankar Subramaniam^a,b

 

Tools for lipidomics: MS prediction and structure manipulation methods
Dawn Cotter^a, Eoin Fahy^a, Manish Sud^a, Shankar Subramaniam^a,b

 

LIPID MAPS Bioinformatics Core^a, SDSC, UCSD, 9500 Gilman Dr, La Jolla, CA 92093; Department of Bioengineering^b, UCSD, 9500, Gilman Dr, La Jolla, CA, 92093; Department of Pharmacology^c, Vanderbilt University Medical Center, Nashville, TN 37232; Department of Cellular and Molecular Medicine^d, UCSD, 9500 Gilman Dr, La Jolla, CA 92093; School of Biology^e, Georgia Institute of Technology, Atlanta, GA 30332; University of Colorado Health Sciences Center^f, Aurora, CO 80045; Department of Biochemistry^g, Duke University Medical Center, Durham, NC 27710; Department of Molecular Genetics^h, University of Texas Southwestern Medical Center, Dallas, Texas 75390; Department of Chemistry and Biochemistry, and Department of Pharmacologyⁱ, UCSD, La Jolla, CA 92093.