Lipidomics studies on macrophages - Foam cell study with wild-type and LDLR(-/-) mice, normal and high-fat diets
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| Legend: |  : View data for technical replicates : Graph of technical replicates(within an expt.)
 : Graph of biological replicates(across expts.) |
|---|
| Details/Graph technical replicates | LM_ID | Name | Mass (neutral) |
WT-Fat WT-Chow KO-Fat KO-Chow |
Units . . . . | |
|---|---|---|---|---|---|---|
|
(BCJ070122) | LMSP02010004 | C16 Cer | 537.5 (ions) | 320 340 440 370 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02020001 | C16DH Cer | 539.5 (ions) | 300 200 430 280 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA04 | C16DH GlcCer | 701.6 (ions) | 38 72 54 84 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010004 | C16DH Sphingomyelin | 704.6 (ions) | 1160 1310 1700 1460 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA03 | C16 GlcCer | 699.6 (ions) | 640 690 610 880 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010003 | C16 Sphingomyelin | 702.6 (ions) | 10690 11940 14450 14020 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02010006 | C18 Cer | 565.5 (ions) | 8 16 14 15 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02020008 | C18DH Cer | 567.6 (ions) | 15 16 32 26 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA19 | C18DH GlcCer | 729.6 (ions) | 33 12 13 9.7 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010020 | C18DH Sphingomyelin | 732.6 (ions) | 26 25 37 24 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA05 | C18 GlcCer | 727.6 (ions) | 21 18 19 19 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010001 | C18 Sphingomyelin | 730.6 (ions) | 160 170 250 170 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02010007 | C20 Cer | 593.6 (ions) | 3.5 6.2 8.7 6.6 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02020009 | C20DH Cer | 595.6 (ions) | 3.3 6.5 14 10 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA20 | C20DH GlcCer | 757.6 (ions) | 19 4.1 0.2 4.1 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010021 | C20DH Sphingomyelin | 760.6 (ions) | 27 29 41 33 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA06 | C20 GlcCer | 755.6 (ions) | 12 10 12 11 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010005 | C20 Sphingomyelin | 758.6 (ions) | 48 48 100 52 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02010008 | C22 Cer | 621.6 (ions) | 35 34 55 40 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02020010 | C22DH Cer | 623.6 (ions) | 14 12 51 25 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA21 | C22DH GlcCer | 785.7 (ions) | 21 18 61 7.2 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010022 | C22DH Sphingomyelin | 788.7 (ions) | 31 30 68 30 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA07 | C22 GlcCer | 783.7 (ions) | 150 110 160 120 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010006 | C22 Sphingomyelin | 786.7 (ions) | 350 320 650 330 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02010009 | C24:1 Cer | 647.6 (ions) | 540 540 590 530 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02020011 | C24:1DH Cer | 649.6 (ions) | 81 53 150 69 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA22 | C24:1DH GlcCer | 811.7 (ions) | 29 28 29 38 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010023 | C24:1DH Sphingomyelin | 814.7 (ions) | 640 730 1090 760 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA08 | C24:1 GlcCer | 809.7 (ions) | 620 630 600 720 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010007 | C24:1 Sphingomyelin | 812.7 (ions) | 3410 4220 4720 4620 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02010012 | C24 Cer | 649.6 (ions) | 100 95 180 120 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02020012 | C24DH Cer | 651.7 (ions) | 34 12 41 19 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA23 | C24DH GlcCer | 813.7 (ions) | 20 23 55 5 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010024 | C24DH Sphingomyelin | 816.7 (ions) | 41 34 68 38 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA09 | C24 GlcCer | 811.7 (ions) | 300 230 330 250 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010008 | C24 Sphingomyelin | 814.7 (ions) | 710 830 1160 850 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02010010 | C26:1 Cer | 675.7 (ions) | 13 6.1 11 6.3 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02020013 | C26:1DH Cer | 677.7 (ions) | 3.6 2.5 3.8 3.1 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA24 | C26:1DH GlcCer | 839.7 (ions) | - 2.5 1.3 2.4 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010025 | C26:1DH Sphingomyelin | 842.7 (ions) | 4.8 4.8 6.8 3.7 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA10 | C26:1 GlcCer | 837.7 (ions) | 5.9 7 5.5 6.3 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010009 | C26:1 Sphingomyelin | 840.7 (ions) | 16 22 25 20 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02010011 | C26 Cer | 677.7 (ions) | 4.3 2.9 3 2.6 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP02020014 | C26DH Cer | 679.7 (ions) | 1.5 0.3 2 0.8 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA25 | C26DH GlcCer | 841.7 (ions) | 22 5.9 53 3 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010026 | C26DH Sphingomyelin | 844.7 (ions) | 2 1.9 2.1 1.5 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP0501AA11 | C26 GlcCer | 839.7 (ions) | 4.2 5.6 4.7 2.5 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP03010010 | C26 Sphingomyelin | 842.7 (ions) | 4.7 5.9 5.8 4.5 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP01020001 | Sphinganine | 301.3 (ions) | 20 13 28 19 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP01050002 | Sphinganine-P | 381.3 (ions) | 20 17 24 16 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP01010001 | Sphingosine | 299.3 (ions) | 260 260 340 260 |
pmol/1E6 cells | |
|
(BCJ070122) | LMSP01050001 | Sphingosine-P | 379.2 (ions) | 370 480 480 420 |
pmol/1E6 cells |
*:The units in the table and graphs correspond to the intensity of each species
divided by the intensity of an appropriate internal standard
(C12 analogs for Cer, GlcCer and SM; C20 analogs for So,Sa; C17 analogs for So-P and Sa-P).
The amount of internal standard added to each sample in the time series and control experiments was identical.
The relative intensity values were converted to pmoles and then normalized to the measured quantity of DNA present
in each RAW cell preparation following treatment with and without Kdo2 lipid A for each time point.