Gene/Proteome Database (LMPD)

LMPD ID
LMP006777
Gene ID
Species
Homo sapiens (Human)
Gene Name
membrane-bound transcription factor peptidase, site 2
Gene Symbol
Synonyms
BRESEK; IFAP; KFSD; KFSDX; OLMSX; S2P
Alternate Names
membrane-bound transcription factor site-2 protease; endopeptidase S2P; SREBPs intramembrane protease; keratosis follicularis spinulosa decalvans; membrane-bound transcription factor protease, site 2; sterol regulatory element-binding proteins intramembrane protease
Chromosome
X
Map Location
Xp22.12-p22.11
EC Number
3.4.24.85
Summary
This gene encodes a intramembrane zinc metalloprotease, which is essential in development. This protease functions in the signal protein activation involved in sterol control of transcription and the ER stress response. Mutations in this gene have been associated with ichthyosis follicularis with atrichia and photophobia (IFAP syndrome); IFAP syndrome has been quantitatively linked to a reduction in cholesterol homeostasis and ER stress response.[provided by RefSeq, Aug 2009]
Orthologs

Proteins

membrane-bound transcription factor site-2 protease
Refseq ID NP_056968
Protein GI 7706693
UniProt ID O43462
mRNA ID NM_015884
Length 519
RefSeq Status REVIEWED
MIPVSLVVVVVGGWTVVYLTDLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTAVFNRAFYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGKTLMQTLAQMMADSPSSYSSSSSSSSSSSSSSSSSSSSSSSLHNEQVLQVVVPGINLPVNQLTYFFTAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISPVQQLRIFCAGIWHNFVLALLGILALVLLPVILLPFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTIAYEPQIGYCISASTLQQLSFPVRAYKRLDGSTECCNNHSLTDVCFSYRNNFNKRLHTCLPARKAVEATQVCRTNKDCKKSSSSSFCIIPSLETHTRLIKVKHPPQIDMLYVGHPLHLHYTVSITSFIPRFNFLSIDLPVVVETFVKYLISLSGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIGFFILLGGSVLLAANVTLGLWMVTAR

Gene Information

Entrez Gene ID
Gene Name
membrane-bound transcription factor peptidase, site 2
Gene Symbol
Species
Homo sapiens

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0000139 TAS:Reactome C Golgi membrane
GO:0005737 IDA:UniProtKB C cytoplasm
GO:0016021 TAS:ProtInc C integral component of membrane
GO:0046872 IEA:UniProtKB-KW F metal ion binding
GO:0004222 TAS:ProtInc F metalloendopeptidase activity
GO:0006987 TAS:Reactome P activation of signaling protein activity involved in unfolded protein response
GO:0044267 TAS:Reactome P cellular protein metabolic process
GO:0008203 TAS:ProtInc P cholesterol metabolic process
GO:0030968 TAS:Reactome P endoplasmic reticulum unfolded protein response
GO:0044281 TAS:Reactome P small molecule metabolic process

KEGG Pathway Links

KEGG Pathway ID Description
hsa04141 Protein processing in endoplasmic reticulum
ko04141 Protein processing in endoplasmic reticulum

REACTOME Pathway Links

REACTOME Pathway ID Description
REACT_147797 Regulation of cholesterol biosynthesis by SREBP (SREBF)

Domain Information

InterPro Annotations

Accession Description
IPR001193 Membrane-bound transcription factor site-2 protease
IPR001478 PDZ domain
IPR008915 Peptidase_M50

UniProt Annotations

Entry Information

Gene Name
membrane-bound transcription factor peptidase, site 2
Protein Entry
MBTP2_HUMAN
UniProt ID
Species
Human

Comments

Comment Type Description
Catalytic Activity Cleaves several transcription factors that are type-2 transmembrane proteins within membrane-spanning domains. Known substrates include sterol regulatory element-binding protein (SREBP) -1, SREBP-2 and forms of the transcriptional activator ATF6. SREBP-2 is cleaved at the site 477-DRSRILL-|- CVLTFLCLSFNPLTSLLQWGGA-505. The residues Asn-Pro, 11 residues distal to the site of cleavage in the membrane-spanning domain, are important for cleavage by S2P endopeptidase. Replacement of either of these residues does not prevent cleavage, but there is no cleavage if both of these residues are replaced.
Cofactor Name=Zn(2+); Xref=ChEBI
Disease IFAP syndrome with or without BRESHECK syndrome (IFAPS) [MIM
Disease Keratosis follicularis spinulosa decalvans X-linked (KFSDX) [MIM
Disease Olmsted syndrome, X-linked (OLMSX) [MIM
Function Intramembrane proteolysis of sterol-regulatory element- binding proteins (SREBPs) within the first transmembrane segment thereby releasing the N-terminal segment with a portion of the transmembrane segment attached. Site-2 cleavage comes after site-1 cleavage which takes place in the lumenal loop.
Similarity Belongs to the peptidase M50A family.
Subcellular Location Membrane ; Multi-pass membrane protein . Cytoplasm .
Tissue Specificity Expressed in heart, brain, placenta, lung, liver, muscle, kidney and pancreas.

Identical and Related Proteins

Unique RefSeq proteins for LMP006777 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
7706693 RefSeq NP_056968 519 membrane-bound transcription factor site-2 protease

Identical Sequences to LMP006777 proteins

Reference Database Accession Length Protein Name
GI:7706693 DBBJ BAG11437.1 519 membrane-bound transcription factor site-2 protease, partial [synthetic construct]
GI:7706693 GenBank AAC51937.1 519 S2P [Homo sapiens]
GI:7706693 GenBank EAW98982.1 519 membrane-bound transcription factor peptidase, site 2 [Homo sapiens]
GI:7706693 RefSeq XP_003819612.1 519 PREDICTED: membrane-bound transcription factor site-2 protease [Pan paniscus]
GI:7706693 SwissProt O43462.1 519 RecName: Full=Membrane-bound transcription factor site-2 protease; AltName: Full=Endopeptidase S2P; AltName: Full=Sterol regulatory element-binding proteins intramembrane protease; Short=SREBPs intramembrane protease [Homo sapiens]

Related Sequences to LMP006777 proteins

Reference Database Accession Length Protein Name
GI:7706693 DBBJ BAF85622.1 519 unnamed protein product [Homo sapiens]
GI:7706693 GenBank ACM86230.1 552 Sequence 11728 from patent US 6812339
GI:7706693 GenBank JAA04855.1 521 membrane-bound transcription factor peptidase, site 2 [Pan troglodytes]
GI:7706693 GenBank JAA19115.1 521 membrane-bound transcription factor peptidase, site 2 [Pan troglodytes]
GI:7706693 GenBank JAA23418.1 521 membrane-bound transcription factor peptidase, site 2 [Pan troglodytes]
GI:7706693 GenBank JAA43253.1 521 membrane-bound transcription factor peptidase, site 2 [Pan troglodytes]