LIPID MAPS® Gene/Proteome Database (LMPD)
The LIPID MAPS® Gene/Proteome Database (LMPD) is comprised of lipid-related genes and proteins; LMPD contains data for over 8,500 genes and over 12,500 proteins from Homo sapiens, Mus musculus, Rattus norvegicus, Saccharomyces cerevisiae, Caenorhabditis elegans, Escherichia coli, Macaca mulata, Drosophila melanogaster, Arabidopsis thaliana and Danio rerio.
We welcome your comments and suggestions from the public with regard to the accuracy and completeness of the LMPD.
| Species | Genes | Proteins |
|---|---|---|
| Human (Homo sapiens) | 1116 | 2273 |
| Mouse (Mus musculus) | 1082 | 1504 |
| Rat (Rattus norvegicus) | 1258 | 1315 |
| Rhesus monkey (Macaca mulata) | 891 | 1634 |
| Yeast (Saccharomyces cerevisiae (s288c)) | 720 | 720 |
| E. coli (Escherichia coli(K12)) | 245 | 245 |
| C. elegans (Caenorhabditis elegans) | 595 | 868 |
| Drosophila (Drosophila melanogaster) | 404 | 1064 |
| Arabidopsis (Arabidopsis thaliana) | 1829 | 2447 |
| Zebrafish (Danio rerio) | 638 | 647 |
Overview of Interfaces
Search LMPD by Keyword / Database ID or Browse by Gene Ontology GO Annotations Each LMPD record contains: Record Overview, Ontology / Pathway Information, Domain, UniProt Annotations, Related Proteins.
- Search by Keyword / Database ID — Search by gene name/symbol/synonyms, LMP ID, EntrezGene ID. Optionally filter by KEGG pathway.
- Browse by GO Annotation — Browse LMPD by GO Annotation. Access corresponding corresponding LMPD records and/or access external database records.
- Download — Download LMPD as a tab-delimited text file.
References
Nucleic Acids Research, LMPD: LIPID MAPS® proteome database, (2006), Vol. 34, Database issue D507-D510., PMID:
16381922