Gene/Proteome Database (LMPD)

LMPD ID
LMP007097
Gene ID
Species
Saccharomyces cerevisiae S288c (Yeast (S288c))
Gene Name
Cyc8p
Gene Symbol
Synonyms
CRT8; SSN6
Chromosome
II

Proteins

Cyc8p
Refseq ID NP_009670
Protein GI 398364855
UniProt ID P14922
mRNA ID NM_001178460
Length 966
MNPGGEQTIMEQPAQQQQQQQQQQQQQQQQAAVPQQPLDPLTQSTAETWLSIASLAETLGDGDRAAMAYDATLQFNPSSAKALTSLAHLYRSRDMFQRAAELYERALLVNPELSDVWATLGHCYLMLDDLQRAYNAYQQALYHLSNPNVPKLWHGIGILYDRYGSLDYAEEAFAKVLELDPHFEKANEIYFRLGIIYKHQGKWSQALECFRYILPQPPAPLQEWDIWFQLGSVLESMGEWQGAKEAYEHVLAQNQHHAKVLQQLGCLYGMSNVQFYDPQKALDYLLKSLEADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDALDAYTRAIRLNPYISEVWYDLGTLYETCNNQLSDALDAYKQAARLDVNNVHIRERLEALTKQLENPGNINKSNGAPTNASPAPPPVILQPTLQPNDQGNPLNTRISAQSANATASMVQQQHPAQQTPINSSATMYSNGASPQLQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAHAQAQAQAQAQAQAQAQAQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQPLPRQQLQQKGVSVQMLNPQQGQPYITQPTVIQAHQLQPFSTQAMEHPQSSQLPPQQQQLQSVQHPQQLQGQPQAQAPQPLIQHNVEQNVLPQKRYMEGAIHTLVDAAVSSSTHTENNTKSPRQPTHAIPTQAPATGITNAEPQVKKQKLNSPNSNINKLVNTATSIEENAKSEVSNQSPAVVESNTNNTSQEEKPVKANSIPSVIGAQEPPQEASPAEEATKAASVSPSTKPLNTEPESSSVQPTVSSESSTTKANDQSTAETIELSTATVPAEASPVEDEVRQHSKEENGTTEASAPSTEEAEPAASRDAEKQQDETAATTITVIKPTLETMETVKEEAKMREEEQTSQEKSPQENTLPRENVVRQVEEDENYDD

Gene Information

Entrez Gene ID
Gene Name
Cyc8p
Gene Symbol
Species
Saccharomyces cerevisiae S288c

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IDA:SGD C nucleus
GO:0017053 IDA:SGD C transcriptional repressor complex
GO:0001191 IDA:SGD F RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription
GO:0001190 IDA:SGD F RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription
GO:0042826 IDA:SGD F histone deacetylase binding
GO:0006338 IGI:SGD P chromatin remodeling
GO:0035955 IMP:SGD P negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter
GO:0000122 IMP:SGD P negative regulation of transcription from RNA polymerase II promoter
GO:0007070 IMP:SGD P negative regulation of transcription from RNA polymerase II promoter during mitosis
GO:0016584 IDA:SGD P nucleosome positioning
GO:0045944 IDA:GOC P positive regulation of transcription from RNA polymerase II promoter
GO:2000531 IMP:SGD P regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter
GO:2001020 IMP:SGD P regulation of response to DNA damage stimulus

KEGG Pathway Links

KEGG Pathway ID Description
ko04111 Cell cycle - yeast
sce04111 Cell cycle - yeast

REACTOME Pathway Links

REACTOME Pathway ID Description
5618682 Chromatin modifying enzymes
5618683 Chromatin organization
5618681 HDMs demethylate histones

Domain Information

InterPro Annotations

Accession Description
IPR001440 Tetratricopeptide TPR1
IPR019734 Tetratricopeptide repeat
IPR013026 Tetratricopeptide repeat-containing domain
IPR011990 Tetratricopeptide-like helical domain

UniProt Annotations

Entry Information

Gene Name
Cyc8p
Protein Entry
CYC8_YEAST
UniProt ID
Species
Yeast (S288c)

Comments

Comment Type Description
Domain The prion domain (PrD) is a Gln/Asn (Q/N)-rich domain, which is unstructured in its native, soluble form, and which forms a parallel in-register beta-sheet in its amyloid form
Domain The prion domain (PrD) is a Gln/Asn (Q/N)-rich domain, which is unstructured in its native, soluble form, and which forms a parallel in-register beta-sheet in its amyloid form. {ECO:0000250}.
Function Acts as component of the CYC8-TUP1 corepressor complex which is involved in the repression of many genes in a wide variety of physiological processes including heme-regulated and catabolite repressed genes. May also be involved in the derepression of at least some target genes. The complex is recruited to target genes by interaction with DNA-bound transcriptional repressors, like MATALPHA2, MIG1, RFX1 and SKO1. The complex recruits histone deacetylases to produce a repressive chromatin structure, interacts with hypoacetylated N-terminal tails of histones H3 and H4 that have been programmed for repression by the action of histone deacetylases and interferes directly with the transcriptional machinery by associating with the RNA polymerase II mediator complex. {ECO:0000269|PubMed:10722672, ECO:0000269|PubMed:11069890, ECO:0000269|PubMed:11230135, ECO:0000269|PubMed:11784848, ECO:0000269|PubMed:14665463}.
Interaction P53096:HOS2; NbExp=4; IntAct=EBI-18215, EBI-8475; P40356:PGD1; NbExp=3; IntAct=EBI-18215, EBI-13268; P48743:RFX1; NbExp=2; IntAct=EBI-18215, EBI-15036; P32561:RPD3; NbExp=6; IntAct=EBI-18215, EBI-15864; P16649:TUP1; NbExp=5; IntAct=EBI-18215, EBI-19654;
Miscellaneous Present with 3890 molecules/cell in log phase SD medium
Miscellaneous Present with 3890 molecules/cell in log phase SD medium. {ECO:0000269|PubMed:14562106}.
Miscellaneous [OCT+] is the prion form of CYC8. [OCT+] is the result of a conformational change of the cellular CYC8 protein that becomes self-propagating and infectious. [OCT+] aggregates sequester soluble CYC8, resulting in increased levels of iso-2- cytochrome c, defects in sporulation and mating, higher levels of invertase derepression and increased flocculation, reminiscent of a partial loss of function of the CYC8-TUP1 corepressor complex. [OCT+] can be cured by GdnHCl and by inactivation of the molecular chaperone HSP104, which is required for [OCT+] propagation. It is speculated that prion properties of transcription factors may generate an optimized phenotypic heterogeneity that buffers yeast populations against diverse environmental insults (PubMed:19219034)
Miscellaneous [OCT+] is the prion form of CYC8. [OCT+] is the result of a conformational change of the cellular CYC8 protein that becomes self-propagating and infectious. [OCT+] aggregates sequester soluble CYC8, resulting in increased levels of iso-2- cytochrome c, defects in sporulation and mating, higher levels of invertase derepression and increased flocculation, reminiscent of a partial loss of function of the CYC8-TUP1 corepressor complex. [OCT+] can be cured by GdnHCl and by inactivation of the molecular chaperone HSP104, which is required for [OCT+] propagation. It is speculated that prion properties of transcription factors may generate an optimized phenotypic heterogeneity that buffers yeast populations against diverse environmental insults (PubMed:19219034). {ECO:0000305|PubMed:19219034}.
Similarity Belongs to the CYC8/SSN6 family
Similarity Belongs to the CYC8/SSN6 family. {ECO:0000305}.
Similarity Contains 10 TPR repeats. {ECO:0000255|PROSITE- ProRule:PRU00339}.
Subcellular Location Nucleus.
Subunit Associates with TUP1 to form the CYC8-TUP1 (or TUP1-SSN6) corepressor complex that is composed of 4 copies of TUP1 and one copy of CYC8. Interacts with MATALPHA2, CTI6, MIG1, TUP1, SUT1, RFX1, PGD1, HOS1, HOS2 AND RPD3. {ECO:0000269|PubMed:10722672, ECO:0000269|PubMed:10759558, ECO:0000269|PubMed:11069890, ECO:0000269|PubMed:11401714, ECO:0000269|PubMed:12086626, ECO:0000269|PubMed:14525981, ECO:0000269|PubMed:7498787, ECO:0000269|PubMed:7724528, ECO:0000269|PubMed:8943325, ECO:0000269|PubMed:9741624}.

Identical and Related Proteins

Unique RefSeq proteins for LMP007097 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
398364855 RefSeq NP_009670 966 Cyc8p

Identical Sequences to LMP007097 proteins

Reference Database Accession Length Protein Name

Related Sequences to LMP007097 proteins

Reference Database Accession Length Protein Name