Gene/Proteome Database (LMPD)

LMPD ID
LMP008180
Gene ID
176072
Species
Caenorhabditis elegans (C. elegans)
Gene Name
Protein LPD-7
Gene Symbol
lpd-7
Synonyms
CELE_R13A5.12
Alternate Names
Protein LPD-7
Chromosome
III

Proteins

Protein LPD-7
Refseq ID NP_498661
Protein GI 17554612
UniProt ID Q95Y89
mRNA ID NM_066260
Length 531
RefSeq Status REVIEWED
MKDRFKQKYTAGAAVAYMSRKQALKKLQLTLKDFRRLCIIKGIYPHEPAHKKQANKGSTANKVFYYRKDINFLAHEPIINKFRDYKVFLRKLNHLKAKKEEDKLKKLYENKPVYSLDTIVKERFPTFGSALRDMDDALSLCFTFAMLPHTRVLKEGMIDSCRKLTAEFMHYVIESQSLRNTFISIKGIYYQAEVHGEKITWVVPHERGLPHVTDVDFTVLVTFVEFYIAMLGFVNFKLYQDIGLFYPPQIGQVVKTDEMETEEYKEKVYSLAKPLAKRKDVEQAEDDEPLDLLGEDSDALAQKVREAKSIKTMFKGCVFYLNRECPKEALTFIIRNGGGIVGWEGGPTDLKADSKNISHHVVDRPMDKLEVNRLYVQPQWVFDCLNARRKLPTERYMPGVALPPHFSPFTSEKAGDYIPFERLEELRSMGKDVSDLEAAIPKTMDELPMRRKEVKPEKPKGIHIAVGQMHKKSKEKFHETVEKGQELKMRELMISKKHQRVYHSMKTTFKRNRNDALKLKKKAKLAKATEA

Gene Information

Entrez Gene ID
176072
Gene Name
Protein LPD-7
Gene Symbol
lpd-7
Species
Caenorhabditis elegans

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005730 IEA:UniProtKB-HAMAP C nucleolus
GO:0030687 IEA:UniProtKB-HAMAP C preribosome, large subunit precursor
GO:0043021 IEA:UniProtKB-HAMAP F ribonucleoprotein complex binding
GO:0019915 IMP:WormBase P lipid storage
GO:0000466 IEA:UniProtKB-HAMAP P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463 IEA:UniProtKB-HAMAP P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Domain Information

InterPro Annotations

Accession Description
IPR001357 BRCT domain
IPR010613 Pescadillo

UniProt Annotations

Entry Information

Gene Name
Protein LPD-7
Protein Entry
PESC_CAEEL
UniProt ID
Q95Y89
Species
C. elegans

Comments

Comment Type Description
Function Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit. {ECO:0000255|HAMAP-Rule:MF_03028}.
Similarity Belongs to the pescadillo family. {ECO:0000255|HAMAP- Rule:MF_03028}.
Similarity Contains 1 BRCT domain. {ECO:0000255|HAMAP- Rule:MF_03028}.
Subcellular Location Nucleus, nucleolus {ECO:0000255|HAMAP- Rule:MF_03028}. Nucleus, nucleoplasm {ECO:0000255|HAMAP- Rule:MF_03028}.

Identical and Related Proteins

Unique RefSeq proteins for LMP008180 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
17554612 RefSeq NP_498661 531 Protein LPD-7

Identical Sequences to LMP008180 proteins

Reference Database Accession Length Protein Name
GI:17554612 EMBL CCD63607.1 531 Protein LPD-7 [Caenorhabditis elegans]
GI:17554612 GenBank AGU20694.1 531 Sequence 79 from patent US 8519225
GI:17554612 SwissProt Q95Y89.1 531 RecName: Full=Pescadillo homolog; AltName: Full=Lipid depleted protein 7 [Caenorhabditis elegans]

Related Sequences to LMP008180 proteins

Reference Database Accession Length Protein Name
GI:17554612 EMBL CAP28832.1 532 Protein CBR-LPD-7 [Caenorhabditis briggsae]
GI:17554612 GenBank EFP10598.1 531 CRE-LPD-7 protein [Caenorhabditis remanei]
GI:17554612 GenBank EGT56674.1 531 CBN-LPD-7 protein [Caenorhabditis brenneri]
GI:17554612 RefSeq XP_002642598.1 532 C. briggsae CBR-LPD-7 protein [Caenorhabditis briggsae]
GI:17554612 RefSeq XP_003099456.1 531 CRE-LPD-7 protein [Caenorhabditis remanei]
GI:17554612 SwissProt A8X871.1 532 RecName: Full=Pescadillo homolog; AltName: Full=Lipid depleted protein 7 [Caenorhabditis briggsae]