Gene/Proteome Database (LMPD)

LMPD ID
LMP009772
Gene ID
840977
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
acyl-[acyl-carrier-protein] desaturase 6
Gene Symbol
AT1G43800
Synonyms
F28H19.7; F28H19_7
Alternate Names
acyl-[acyl-carrier-protein] desaturase 6
Chromosome
1
EC Number
1.14.19.2

Proteins

acyl-[acyl-carrier-protein] desaturase 6
Refseq ID NP_175048
Protein GI 15218536
UniProt ID Q84VY3
mRNA ID NM_103508
Length 391
RefSeq Status REVIEWED
MLAHKSLLSFTTQWATLMPSPSTFLASRPRGPAKISAVAAPVRPALKHQNKIHTMPPEKMEIFKSLDGWAKDQILPLLKPVDQCWQPASFLPDPALPFSEFTDQVRELRERTASLPDEYFVVLVGDMITEDALPTYQTMINTLDGVRDETGASESAWASWTRAWTAEENRHGDLLRTYLYLSGRVDMLMVERTVQHLIGSGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKSAGDPVLARICGTIAADEKRHENAYVRIVEKLLEIDPNGAVSAVADMMRKKITMPAHLMTDGRDPMLFEHFSAVAQRLEVYTADDYADILEFLVGRWRLEKLEGLTGEGQRAQEFVCGLAQRIRRLQERADERAKKLKKTHEVCFSWIFDKQISV

Gene Information

Entrez Gene ID
840977
Gene Name
acyl-[acyl-carrier-protein] desaturase 6
Gene Symbol
AT1G43800
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0009507 IEA:UniProtKB-KW C chloroplast
GO:0016020 IDA:TAIR C membrane
GO:0045300 IEA:UniProtKB-EC F acyl-[acyl-carrier-protein] desaturase activity
GO:0046872 IEA:UniProtKB-KW F metal ion binding
GO:0006633 IEA:UniProtKB-KW P fatty acid biosynthetic process

KEGG Pathway Links

KEGG Pathway ID Description
ath01040 Biosynthesis of unsaturated fatty acids
ath00061 Fatty acid biosynthesis
ath01212 Fatty acid metabolism

BIOCYC Pathway Links

BIOCYC Pathway ID Description
PWY-5147 oleate biosynthesis I (plants)

Domain Information

InterPro Annotations

Accession Description
IPR005067 Fatty acid desaturase, type 2
IPR009078 Ferritin-like superfamily
IPR012348 Ribonucleotide reductase-related
IPR005803 Stearoyl-ACP desaturase, conserved site

UniProt Annotations

Entry Information

Gene Name
acyl-[acyl-carrier-protein] desaturase 6
Protein Entry
STAD6_ARATH
UniProt ID
Q84VY3
Species
Arabidopsis

Comments

Comment Type Description
Catalytic Activity Stearoyl-[acyl-carrier-protein] + reduced acceptor + O(2) = oleoyl-[acyl-carrier-protein] + acceptor + 2 H(2)O.
Cofactor Name=Fe cation; Xref=ChEBI:CHEBI:24875; Evidence={ECO:0000250}; Note=Binds 2 iron ions per subunit. {ECO:0000250};
Function Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons Delta(9) and Delta(10) of the acyl chain. {ECO:0000250}.
Pathway Lipid metabolism; fatty acid metabolism.
Sequence Caution Sequence=AAF63100.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};
Similarity Belongs to the fatty acid desaturase family. {ECO:0000305}.
Subcellular Location Plastid, chloroplast {ECO:0000305}.
Subunit Homodimer. {ECO:0000250}.

Identical and Related Proteins

Unique RefSeq proteins for LMP009772 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
15218536 RefSeq NP_175048 391 acyl-[acyl-carrier-protein] desaturase 6

Identical Sequences to LMP009772 proteins

Reference Database Accession Length Protein Name
GI:15218536 EMBL CAW56215.1 391 unnamed protein product [Arabidopsis thaliana]
GI:15218536 EMBL CBC31051.1 391 unnamed protein product [Arabidopsis thaliana]
GI:15218536 GenBank ACW92838.1 391 Sequence 11482 from patent US 7569389
GI:15218536 GenBank ACW99283.1 391 Sequence 20233 from patent US 7569389
GI:15218536 GenBank AEE31998.1 391 acyl-[acyl-carrier-protein] desaturase 6 [Arabidopsis thaliana]
GI:15218536 SwissProt Q84VY3.2 391 RecName: Full=Acyl-[acyl-carrier-protein] desaturase 6, chloroplastic; AltName: Full=Stearoyl-ACP desaturase 6; Flags: Precursor [Arabidopsis thaliana]

Related Sequences to LMP009772 proteins

Reference Database Accession Length Protein Name
GI:15218536 DBBJ BAE99961.1 391 putative stearoyl acyl carrier protein desaturase [Arabidopsis thaliana]
GI:15218536 EMBL CAW56254.1 391 unnamed protein product [Arabidopsis thaliana]
GI:15218536 EMBL CAW56259.1 391 unnamed protein product [Arabidopsis thaliana]
GI:15218536 EMBL CBC31128.1 391 unnamed protein product [Arabidopsis thaliana]
GI:15218536 GenBank AAO42871.1 391 At1g43800 [Arabidopsis thaliana]
GI:15218536 GenBank ACW98201.1 391 Sequence 18756 from patent US 7569389