Gene/Proteome Database (LMPD)
LMPD ID
LMP010210
Gene ID
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
fasciclin-like arabinogalactan protein 4
Gene Symbol
Synonyms
salt overly sensitive 5; SOS5
Alternate Names
fasciclin-like arabinogalactan protein 4
Chromosome
3
Summary
Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.
Orthologs
Proteins
| fasciclin-like arabinogalactan protein 4 | |
|---|---|
| Refseq ID | NP_190239 |
| Protein GI | 15231453 |
| UniProt ID | Q9SNC3 |
| mRNA ID | NM_114522 |
| Length | 420 |
| RefSeq Status | REVIEWED |
| MANVISISHFTLLALPYLLLLLSSTAAAINVTAVLSSFPNLSSFSNLLVSSGIAAELSGRNSLTLLAVPNSQFSSASLDLTRRLPPSALADLLRFHVLLQFLSDSDLRRIPPSGSAVTTLYEASGRTFFGSGSVNVTRDPASGSVTIGSPATKNVTVLKLLETKPPNITVLTVDSLIVPTGIDITASETLTPPPTSTSLSPPPAGINLTQILINGHNFNVALSLLVASGVITEFENDERGAGITVFVPTDSAFSDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELFPKSGQPVATAPPQEISLSPESSSEQPSRLVSPPREIVSSGAVKRPLGFLVLWCWCIAFCYVLV | |
Gene Information
Entrez Gene ID
Gene Name
fasciclin-like arabinogalactan protein 4
Gene Symbol
Species
Arabidopsis thaliana
Gene Ontology (GO Annotations)
| GO ID | Source | Type | Description |
|---|---|---|---|
| GO:0031225 | TAS:TAIR | C | anchored component of membrane |
| GO:0046658 | IDA:TAIR | C | anchored component of plasma membrane |
| GO:0009897 | IDA:TAIR | C | external side of plasma membrane |
| GO:0005886 | IDA:TAIR | C | plasma membrane |
| GO:0030247 | TAS:TAIR | F | polysaccharide binding |
| GO:0007155 | ISS:TAIR | P | cell adhesion |
| GO:0009825 | IMP:TAIR | P | multidimensional cell growth |
| GO:0009651 | IMP:TAIR | P | response to salt stress |
Domain Information
InterPro Annotations
| Accession | Description |
|---|---|
| IPR000782 | FAS1 domain |
UniProt Annotations
Entry Information
Gene Name
fasciclin-like arabinogalactan protein 4
Protein Entry
FLA4_ARATH
UniProt ID
Species
Arabidopsis
Comments
| Comment Type | Description |
|---|---|
| Function | May be a cell surface adhesion protein that is required for normal cell expansion. |
| Induction | Up-regulated by abscisic acid, cold and drought treatments, but not by high salt. {ECO:0000269|PubMed:12509519}. |
| Similarity | Belongs to the fasciclin-like AGP family. {ECO:0000305}. |
| Similarity | Contains 2 FAS1 domains. {ECO:0000255|PROSITE- ProRule:PRU00082}. |
| Subcellular Location | Cell membrane {ECO:0000269|PubMed:12509519}; Lipid-anchor, GPI-anchor {ECO:0000269|PubMed:12509519}. |
| Tissue Specificity | Expressed in all plant organs and tissues, including guard cells in the leaf. {ECO:0000269|PubMed:12509519}. |
Identical and Related Proteins
Unique RefSeq proteins for LMP010210 (as displayed in Record Overview)
| Protein GI | Database | Accession | Length | Protein Name |
|---|---|---|---|---|
| 15231453 | RefSeq | NP_190239 | 420 | fasciclin-like arabinogalactan protein 4 |
Identical Sequences to LMP010210 proteins
| Reference | Database | Accession | Length | Protein Name |
|---|---|---|---|---|
| GI:15231453 | EMBL | CBC81254.1 | 420 | unnamed protein product [Arabidopsis thaliana] |
| GI:15231453 | EMBL | CBC49264.1 | 420 | unnamed protein product [Arabidopsis thaliana] |
| GI:15231453 | GenBank | AEE78171.1 | 420 | fasciclin-like arabinogalactan protein 4 [Arabidopsis thaliana] |
| GI:15231453 | GenBank | AEQ45484.1 | 420 | Sequence 78 from patent US 8034993 |
| GI:15231453 | GenBank | AFO05583.1 | 420 | Sequence 78 from patent US 8217225 |
| GI:15231453 | GenBank | AGF14326.1 | 420 | Sequence 13745 from patent US 8362325 |
Related Sequences to LMP010210 proteins
| Reference | Database | Accession | Length | Protein Name |
|---|---|---|---|---|
| GI:15231453 | GenBank | EFH53751.1 | 420 | hypothetical protein ARALYDRAFT_905848 [Arabidopsis lyrata subsp. lyrata] |
| GI:15231453 | RefSeq | XP_002877492.1 | 420 | hypothetical protein ARALYDRAFT_905848 [Arabidopsis lyrata subsp. lyrata] |
| GI:15231453 | RefSeq | XP_010514979.1 | 425 | PREDICTED: fasciclin-like arabinogalactan protein 4 [Camelina sativa] |
| GI:15231453 | RefSeq | XP_010426091.1 | 434 | PREDICTED: fasciclin-like arabinogalactan protein 4 isoform X1 [Camelina sativa] |
| GI:15231453 | RefSeq | XP_010426092.1 | 424 | PREDICTED: fasciclin-like arabinogalactan protein 4 isoform X2 [Camelina sativa] |
| GI:15231453 | RefSeq | XP_010426093.1 | 424 | PREDICTED: fasciclin-like arabinogalactan protein 4 isoform X3 [Camelina sativa] |