Gene/Proteome Database (LMPD)

LMPD ID
LMP010417
Gene ID
834060
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
glycerol-3-phosphate dehydrogenase [NAD+]
Gene Symbol
AT5G40610
Synonyms
MNF13.130; MNF13_130
Alternate Names
glycerol-3-phosphate dehydrogenase [NAD+]
Chromosome
5
EC Number
1.1.1.8

Proteins

glycerol-3-phosphate dehydrogenase [NAD+]
Refseq ID NP_198877
Protein GI 15237458
UniProt ID Q9SCX9
mRNA ID NM_123425
Length 400
RefSeq Status REVIEWED
MRFRSFFFSSSIFSLSHSRSPSLSSSRFSSLSAAMSPALEKSRQGNGGCNDDSKSKVTVVGSGNWGSVAAKLIASNALKLPSFHDEVRMWVFEEVLPNGEKLNDVINKTNENVKYLPGIKLGRNVVADPDLENAVKDANMLVFVTPHQFMDGICKKLDGKITGDVEAISLVKGMEVKKEGPCMISSLISKQLGINCCVLMGANIANEIAVEKFSEATVGYRGSREIADTWVQLFSTPYFMVTPVHDVEGVELCGTLKNVVAIAAGFVDGLEMGNNTKAAIMRIGLREMKALSKLLFPSVKDSTFFESCGVADVITTCLGGRNRRVAEAFAKSRGKRSFDELEAEMLQGQKLQGVSTAREVYEVLKHCGWLEMFPLFSTVHQICTGRLQPEAIVQYRENKL

Gene Information

Entrez Gene ID
834060
Gene Name
glycerol-3-phosphate dehydrogenase [NAD+]
Gene Symbol
AT5G40610
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0009507 IEA:UniProtKB-KW C chloroplast
GO:0009331 IEA:InterPro C glycerol-3-phosphate dehydrogenase complex
GO:0004367 IEA:UniProtKB-EC F glycerol-3-phosphate dehydrogenase [NAD+] activity
GO:0051287 IEA:InterPro F NAD binding
GO:0005975 IEA:InterPro P carbohydrate metabolic process
GO:0046168 IEA:InterPro P glycerol-3-phosphate catabolic process
GO:0006650 IEA:UniProtKB-UniPathway P glycerophospholipid metabolic process
GO:0008654 IEA:UniProtKB-KW P phospholipid biosynthetic process

KEGG Pathway Links

KEGG Pathway ID Description
ath00564 Glycerophospholipid metabolism
ko00564 Glycerophospholipid metabolism

REACTOME Pathway Links

REACTOME Pathway ID Description
6253801 Glycerophospholipid biosynthesis
6253800 Synthesis of PA

Domain Information

InterPro Annotations

Accession Description
IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like
IPR013328 Dehydrogenase, multihelical
IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent
IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal
IPR017751 Glycerol-3-phosphate dehydrogenase, NAD-dependent, eukaryotic
IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
IPR016040 NAD(P)-binding domain

UniProt Annotations

Entry Information

Gene Name
glycerol-3-phosphate dehydrogenase [NAD+]
Protein Entry
GPDA1_ARATH
UniProt ID
Q9SCX9
Species
Arabidopsis

Comments

Comment Type Description
Biophysicochemical Properties Kinetic parameters: KM=12.8 uM for glycerone phosphate {ECO:0000269|Ref.1}; Vmax=3.2 umol/sec/mg enzyme toward glycerone phosphate {ECO:0000269|Ref.1};
Catalytic Activity sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH.
Function Involved in glycerolipid metabolism. {ECO:0000250}.
Pathway Membrane lipid metabolism; glycerophospholipid metabolism.
Similarity Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. {ECO:0000305}.
Subcellular Location Plastid, chloroplast {ECO:0000269|Ref.1}.
Tissue Specificity Expressed in young seedlings, flowers and siliques. Expressed at low levels in roots. {ECO:0000269|Ref.1}.

Identical and Related Proteins

Unique RefSeq proteins for LMP010417 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
15237458 RefSeq NP_198877 400 glycerol-3-phosphate dehydrogenase [NAD+]

Identical Sequences to LMP010417 proteins

Reference Database Accession Length Protein Name
GI:15237458 GenBank AAN41367.1 400 putative dihydroxyacetone 3-phosphate reductase dhaprd [Arabidopsis thaliana]
GI:15237458 GenBank ABL51175.1 400 Sequence 8 from patent US 7135618
GI:15237458 GenBank AFO16620.1 400 Sequence 8 from patent US 8212111
GI:15237458 GenBank AGU26031.1 400 Sequence 8 from patent US 8492612
GI:15237458 gnl TAIR 400 glycerol-3-phosphate dehydrogenase [NAD+] [Arabidopsis thaliana]
GI:15237458 SwissProt Q9SCX9.1 400 RecName: Full=Glycerol-3-phosphate dehydrogenase [NAD(+)] 1, chloroplastic; Flags: Precursor [Arabidopsis thaliana]

Related Sequences to LMP010417 proteins

Reference Database Accession Length Protein Name
GI:15237458 GenBank AAL87336.1 395 putative dihydroxyacetone 3-phosphate reductase dhaprd, partial [Arabidopsis thaliana]
GI:15237458 GenBank EOA16761.1 398 hypothetical protein CARUB_v10004974mg [Capsella rubella]
GI:15237458 RefSeq XP_006283863.1 398 hypothetical protein CARUB_v10004974mg [Capsella rubella]
GI:15237458 RefSeq XP_010435997.1 400 PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)] 1, chloroplastic [Camelina sativa]
GI:15237458 RefSeq XP_010441214.1 402 PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)] 1, chloroplastic-like [Camelina sativa]
GI:15237458 RefSeq XP_010450637.1 402 PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)] 1, chloroplastic-like [Camelina sativa]