Gene/Proteome Database (LMPD)

LMPD ID
LMP010473
Gene ID
825287
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
homeodomain GLABROUS 1
Gene Symbol
HDG1
Synonyms
HD-GL2-1; HDG1; homeodomain GLABROUS 1; HOMEODOMAIN-GLABRA2 1
Alternate Names
homeodomain GLABROUS 1
Chromosome
3
Summary
Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.
Orthologs
View orthologs and multiple alignments for HDG1

Proteins

homeodomain GLABROUS 1
Refseq ID NP_191674
Protein GI 15233048
UniProt ID Q9M2E8
mRNA ID NM_115979
Length 808
RefSeq Status REVIEWED
MNFNGFLDDGAGASKLLSDAPYNNHFSFSAVDTMLGSAAIAPSQSLPFSSSGLSLGLQTNGEMSRNGEIMESNVSRKSSRGEDVESRSESDNAEAVSGDDLDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMSVREAMRNPMCGNCGGPAVIGEISMEEQHLRIENSRLKDELDRVCALTGKFLGRSNGSHHIPDSALVLGVGVGSGGCNVGGGFTLSSPLLPQASPRFEISNGTGSGLVATVNRQQPVSVSDFDQRSRYLDLALAAMDELVKMAQTREPLWVRSSDSGFEVLNQEEYDTSFSRCVGPKQDGFVSEASKEAGTVIINSLALVETLMDSERWAEMFPSMVSRTSTTEIISSGMGGRNGALHLMHAELQLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSSCRRLPSGCLVQDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILMSSTVSTSTNPSPINCNGRKSMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRIMTRKSVNNPGEPPGIILNAATSVWMPVSPRRLFDFLGNERLRSEWDILSNGGPMKEMAHIAKGHDRSNSVSLLRASAINANQSSMLILQETSIDAAGAVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILPNGQAGTQRCAAEERNSIGNGGCMEEGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCDST

Gene Information

Entrez Gene ID
825287
Gene Name
homeodomain GLABROUS 1
Gene Symbol
HDG1
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0008289 IEA:InterPro F lipid binding
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0003700 ISS:TAIR F sequence-specific DNA binding transcription factor activity
GO:0048497 IGI:TAIR P maintenance of floral organ identity
GO:0006351 IEA:UniProtKB-KW P transcription, DNA-templated

Domain Information

InterPro Annotations

Accession Description
IPR001356 Homeobox domain
IPR017970 Homeobox, conserved site
IPR009057 Homeodomain-like
IPR002913 START_lipid-bd_dom

UniProt Annotations

Entry Information

Gene Name
homeodomain GLABROUS 1
Protein Entry
HDG1_ARATH
UniProt ID
Q9M2E8
Species
Arabidopsis

Comments

Comment Type Description
Function Probable transcription factor. {ECO:0000250}.
Similarity Belongs to the HD-ZIP homeobox family. Class IV subfamily. {ECO:0000305}.
Similarity Contains 1 START domain. {ECO:0000255|PROSITE- ProRule:PRU00197}.
Similarity Contains 1 homeobox DNA-binding domain. {ECO:0000255|PROSITE-ProRule:PRU00108}.
Subcellular Location Nucleus {ECO:0000305}.
Tissue Specificity Expressed in trichomes forming at the base of young leaves, in endodermal cell lines around emergent lateral roots and in the epidermal layer of the stamen filament. {ECO:0000269|PubMed:16778018}.

Identical and Related Proteins

Unique RefSeq proteins for LMP010473 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
15233048 RefSeq NP_191674 808 homeodomain GLABROUS 1

Identical Sequences to LMP010473 proteins

Reference Database Accession Length Protein Name
GI:15233048 GenBank ADS94044.1 808 Sequence 130 from patent US 7825296
GI:15233048 GenBank ADT60127.1 808 Sequence 1144 from patent US 7847156
GI:15233048 GenBank AEE80161.1 808 homeodomain GLABROUS 1 [Arabidopsis thaliana]
GI:15233048 GenBank AEI23140.1 808 Sequence 1212 from patent US 7960612
GI:15233048 GenBank AEQ40237.1 808 Sequence 552 from patent US 8030546
GI:15233048 GenBank AGX49135.1 808 Sequence 130 from patent US 8541665

Related Sequences to LMP010473 proteins

Reference Database Accession Length Protein Name
GI:15233048 EMBL CAB45018.1 808 homeodomain GLABRA2 like 1 protein [Arabidopsis thaliana]
GI:15233048 GenBank EFH52855.1 811 hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp. lyrata]
GI:15233048 GenBank EOA23511.1 803 hypothetical protein CARUB_v10016704mg [Capsella rubella]
GI:15233048 RefSeq XP_002876596.1 811 hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp. lyrata]
GI:15233048 RefSeq XP_006290613.1 803 hypothetical protein CARUB_v10016704mg [Capsella rubella]
GI:15233048 RefSeq XP_010469037.1 834 PREDICTED: homeobox-leucine zipper protein HDG1 isoform X2 [Camelina sativa]