Gene/Proteome Database (LMPD)

LMPD ID
LMP010474
Gene ID
840369
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
homeodomain GLABROUS 10
Gene Symbol
HDG10
Synonyms
F21H2.11; F21H2_11; HDG10; homeodomain GLABROUS 10
Alternate Names
homeodomain GLABROUS 10
Chromosome
1
Summary
Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.
Orthologs
View orthologs and multiple alignments for HDG10

Proteins

homeodomain GLABROUS 10
Refseq ID NP_174724
Protein GI 15218724
UniProt ID Q9S9Z0
mRNA ID NM_103188
Length 708
RefSeq Status REVIEWED
MDSSHNDSSSDEEGIDSNNRRHHSNHQVQRLEAFFHECPHPDDSQRRQLGNELNLKHKQIKFWFQNRRTQARIHNEKADNIALRVENMKIRCVNEAMEKALETVLCPPCGGPHGKEEQLCNLQKLRTKNVILKTEYERLSSYLTKHGGYSIPSVDALPDLHGPSTYGSTSNNRPASYGSSSNHLPQQSSLLRRPFTRELINTTPLPKPVLLQHFQQLSQLEKNRMFEIAKNAVAEVMSLIQMEHSMWIKSTIDGRAIIDPGNYKRYFTKNSHLKSRSALQSHHESSMEVVVVQMDARNLVDMFLNTEKWARLFPTIVTEAKTIHVLDSMDHPRQTFSRVVYEQLHILSPLVLPREFIILRTCQQMKEDLWLIADVSCYLQNVEFESTAPICTKRPSGVLIQALPHGRSKVTWIEHVEVTDKVWPHQLYRDLLYGGFGYGARRWTATLQRMCERLSLYSMTDFPPTDYPGVVKTIEGRRSVMSLGERMLKNFAWIMKMSDKLDLPQQSGANNSGVRISVRTNTEAGQPPGLIVCAGSSLSLPLPPLQVYDFLRNLEVRHQWDVHCQGNPVTEAARFVTGPDQKNNVTFLQPSSVGEYKLMILQDGFIDALGGMVVYAPMNLNTAYSAISGQVDPSTIPILPSGFIISRDSHPSSSEVDGGSMTLLTLAFQIFVTGPSYYTDLNLKDSATTVNTLVSSAVQRIKAMLNCE

Gene Information

Entrez Gene ID
840369
Gene Name
homeodomain GLABROUS 10
Gene Symbol
HDG10
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0003677 IEA:UniProtKB-KW F DNA binding
GO:0008289 IEA:InterPro F lipid binding
GO:0003700 ISS:TAIR F sequence-specific DNA binding transcription factor activity
GO:0006351 IEA:UniProtKB-KW P transcription, DNA-templated

Domain Information

InterPro Annotations

Accession Description
IPR001356 Homeobox domain
IPR009057 Homeodomain-like
IPR023393 START-like domain
IPR002913 START_lipid-bd_dom

UniProt Annotations

Entry Information

Gene Name
homeodomain GLABROUS 10
Protein Entry
HDG10_ARATH
UniProt ID
Q9S9Z0
Species
Arabidopsis

Comments

Comment Type Description
Function Probable transcription factor. {ECO:0000250}.
Sequence Caution Sequence=AAF79277.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
Similarity Belongs to the HD-ZIP homeobox family. Class IV subfamily. {ECO:0000305}.
Similarity Contains 1 START domain. {ECO:0000255|PROSITE- ProRule:PRU00197}.
Similarity Contains 1 homeobox DNA-binding domain. {ECO:0000255|PROSITE-ProRule:PRU00108}.
Subcellular Location Nucleus {ECO:0000305}.
Tissue Specificity Expressed in exclusively in anthers with highest levels in the tapetum and pollen grains. {ECO:0000269|PubMed:16778018}.

Identical and Related Proteins

Unique RefSeq proteins for LMP010474 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
15218724 RefSeq NP_174724 708 homeodomain GLABROUS 10

Identical Sequences to LMP010474 proteins

Reference Database Accession Length Protein Name
GI:15218724 GenBank AAD46012.1 708 Similar to gb|Z54356 HD-ZIP protein (Athb-10) from Arabidopsis thaliana and contains a PF|00046 homeobox domain [Arabidopsis thaliana]
GI:15218724 GenBank ACW99077.1 708 Sequence 19950 from patent US 7569389
GI:15218724 GenBank AEE31732.1 708 homeodomain GLABROUS 10 [Arabidopsis thaliana]
GI:15218724 SwissProt Q9S9Z0.1 708 RecName: Full=Homeobox-leucine zipper protein HDG10; AltName: Full=HD-ZIP protein HDG10; AltName: Full=Homeodomain GLABRA 2-like protein 10; AltName: Full=Homeodomain transcription factor HDG10; AltName: Full=Protein HOMEODOMAIN GLABROUS 10 [Arabidopsis thaliana]

Related Sequences to LMP010474 proteins

Reference Database Accession Length Protein Name
GI:15218724 GenBank ACW99078.1 621 Sequence 19951 from patent US 7569389
GI:15218724 GenBank ACW99079.1 612 Sequence 19952 from patent US 7569389
GI:15218724 GenBank EOA19553.1 724 hypothetical protein CARUB_v10002574mg [Capsella rubella]
GI:15218724 RefSeq XP_006286655.1 724 hypothetical protein CARUB_v10002574mg [Capsella rubella]
GI:15218724 RefSeq XP_010461278.1 715 PREDICTED: homeobox-leucine zipper protein HDG10-like [Camelina sativa]
GI:15218724 RefSeq XP_010478910.1 714 PREDICTED: homeobox-leucine zipper protein HDG10-like [Camelina sativa]