Gene/Proteome Database (LMPD)

LMPD ID
LMP010476
Gene ID
838371
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
homeobox-leucine zipper protein HDG12
Gene Symbol
HDG12
Synonyms
F2H15.14; F2H15_14; HDG12; homeodomain GLABROUS 12
Chromosome
1
Summary
Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Together with HDG11, it is involved in trichome branching.
Orthologs
View orthologs and multiple alignments for HDG12

Proteins

homeobox-leucine zipper protein HDG12
Refseq ID NP_564041
Protein GI 42562138
UniProt ID Q9LMT8
mRNA ID NM_101655
Length 687
RefSeq Status REVIEWED
MEFLGDSQNHDSSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQKKAQHERADNCALKEENDKIRCENIAIREAIKHAICPSCGDSPVNEDSYFDEQKLRIENAQLRDELERVSSIAAKFLGRPISHLPPLLNPMHVSPLELFHTGPSLDFDLLPGSCSSMSVPSLPSQPNLVLSEMDKSLMTNIAVTAMEELLRLLQTNEPLWIKTDGCRDVLNLENYENMFTRSSTSGGKKNNLGMEASRSSGVVFTNAITLVDMLMNSVKLTELFPSIVASSKTLAVISSGLRGNHGDALHLMIEELQVLSPLVTTREFCVLRYCQQIEHGTWAIVNVSYEFPQFISQSRSYRFPSGCLIQDMSNGYSKVTWVEHGEFEEQEPIHEMFKDIVHKGLAFGAERWIATLQRMCERFTNLLEPATSSLDLGGVIPSPEGKRSIMRLAHRMVSNFCLSVGTSNNTRSTVVSGLDEFGIRVTSHKSRHEPNGMVLCAATSFWLPISPQNVFNFLKDERTRPQWDVLSNGNSVQEVAHITNGSNPGNCISVLRGFNASSSQNNMLILQESCIDSSSAALVIYTPVDLPALNIAMSGQDTSYIPILPSGFAISPDGSSKGGGSLITVGFQIMVSGLQPAKLNMESMETVNNLINTTVHQIKTTLNCPSTA

Gene Information

Entrez Gene ID
838371
Gene Name
homeobox-leucine zipper protein HDG12
Gene Symbol
HDG12
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-SubCell C nucleus
GO:0008289 IEA:InterPro F lipid binding
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0006355 IEA:InterPro P regulation of transcription, DNA-templated

Domain Information

InterPro Annotations

Accession Description
IPR001356 Homeobox domain
IPR017970 Homeobox, conserved site
IPR009057 Homeodomain-like
IPR023393 START-like domain
IPR002913 START_lipid-bd_dom

UniProt Annotations

Entry Information

Gene Name
homeobox-leucine zipper protein HDG12
Protein Entry
HDG12_ARATH
UniProt ID
Q9LMT8
Species
Arabidopsis

Comments

Comment Type Description
Similarity Contains START domain.
Subcellular Location Nucleus .

Identical and Related Proteins

Unique RefSeq proteins for LMP010476 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
42562138 RefSeq NP_564041 687 homeobox-leucine zipper protein HDG12

Identical Sequences to LMP010476 proteins

Reference Database Accession Length Protein Name
GI:42562138 DBBJ BAH30303.1 687 hypothetical protein, partial [Arabidopsis thaliana]
GI:42562138 GenBank AAF97271.1 687 Strong similarity to meristem L1 layer homeobox protein (ATML1) from Arabidopsis thaliana gb|U37589 and contains Transposase PF|01527, Homeobox PF|00046, and START PF|01852 domains. EST gb|AI995645 comes from this gene [Arabidopsis thaliana]
GI:42562138 GenBank ACW26331.1 687 Sequence 2 from patent US 7563943
GI:42562138 GenBank ADF23054.1 687 Sequence 2 from patent US 7678960
GI:42562138 GenBank AEE29652.1 687 homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
GI:42562138 SwissProt Q9LMT8.1 687 RecName: Full=Homeobox-leucine zipper protein HDG12; AltName: Full=HD-ZIP protein HDG12; AltName: Full=Homeodomain GLABRA 2-like protein 12; AltName: Full=Homeodomain transcription factor HDG12; AltName: Full=Protein HOMEODOMAIN GLABROUS 12 [Arabidopsis thaliana]

Related Sequences to LMP010476 proteins

Reference Database Accession Length Protein Name
GI:42562138 GenBank EOA39819.1 686 hypothetical protein CARUB_v10008485mg [Capsella rubella]
GI:42562138 RefSeq XP_006306921.1 686 hypothetical protein CARUB_v10008485mg [Capsella rubella]
GI:42562138 RefSeq XP_006416656.1 695 hypothetical protein EUTSA_v10006969mg [Eutrema salsugineum]
GI:42562138 RefSeq XP_010498166.1 691 PREDICTED: homeobox-leucine zipper protein HDG12-like [Camelina sativa]
GI:42562138 RefSeq XP_010498167.1 691 PREDICTED: homeobox-leucine zipper protein HDG12-like [Camelina sativa]
GI:42562138 RefSeq XP_010476956.1 689 PREDICTED: homeobox-leucine zipper protein HDG12 [Camelina sativa]