Gene/Proteome Database (LMPD)

LMPD ID
LMP010480
Gene ID
834733
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
homeobox-leucine zipper protein HDG5
Gene Symbol
HB-7
Synonyms
HDG5; homeobox-7; HOMEODOMAIN GLABROUS 5; MQD22.1; MQD22_1
Alternate Names
homeobox-leucine zipper protein HDG5
Chromosome
5

Proteins

homeobox-leucine zipper protein HDG5
Refseq ID NP_199499
Protein GI 334188232
UniProt ID Q9FJS2
mRNA ID NM_124059
Length 826
RefSeq Status REVIEWED
MLTMGEGNVMTSNNRFASPPQQPSSSSPGTIQNPNFNFIPFNSYSSIIPKEEHGMMSMMMMMGDGTVEEMMENGSAGGSFGSGSEQAEDPKFGNESDVNELHDDEQPPPAKKKRYHRHTNRQIQEMEALFKENPHPDDKQRKRLSAELGLKPRQVKFWFQNRRTQMKAQQDRNENVMLRAENDNLKSENCHLQAELRCLSCPSCGGPTVLGDIPFNEIHIENCRLREELDRLCCIASRYTGRPMQSMPPSQPLINPSPMLPHHQPSLELDMSVYAGNFPEQSCTDMMMLPPQDTACFFPDQTANNNNNNNMLLADEEKVIAMEFAVSCVQELTKMCDTEEPLWIKKKSDKIGGEILCLNEEEYMRLFPWPMENQNNKGDFLREASKANAVVIMNSITLVDAFLNADKWSEMFCSIVARAKTVQIISSGVSGASGSLLLMFAELQVLSPLVPTREAYFLRYVEQNAETGNWAIVDFPIDSFHDQMQPMNTITHEYKRKPSGCIIQDMPNGYSQVKWVEHVEVDEKHVHETFAEYVKSGMAFGANRWLDVLQRQCERIASLMARNITDLGVISSAEARRNIMRLSQRLVKTFCVNISTAYGQSWTALSETTKDTVRITTRKMCEPGQPTGVVLCAVSTTWLPFSHHQVFDLIRDQHHQSLLEVLFNGNSPHEVAHIANGSHPGNCISLLRINVASNSWHNVELMLQESCIDNSGSLIVYSTVDVDSIQQAMNGEDSSNIPILPLGFSIVPVNPPEGISVNSHSPPSCLLTVGIQVLASNVPTAKPNLSTVTTINNHLCATVNQITSALSNTITPVIASSADVSNQEVS

Gene Information

Entrez Gene ID
834733
Gene Name
homeobox-leucine zipper protein HDG5
Gene Symbol
HB-7
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0008289 IEA:InterPro F lipid binding
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0006355 IEA:UniProtKB-KW P regulation of transcription, DNA-templated
GO:0006351 IEA:UniProtKB-KW P transcription, DNA-templated

Domain Information

InterPro Annotations

Accession Description
IPR017970 Homeobox, conserved site
IPR001356 Homeobox domain
IPR009057 Homeodomain-like
IPR002913 START_lipid-bd_dom

UniProt Annotations

Entry Information

Gene Name
homeobox-leucine zipper protein HDG5
Protein Entry
HDG5_ARATH
UniProt ID
Q9FJS2
Species
Arabidopsis

Comments

Comment Type Description
Function Probable transcription factor. {ECO:0000250}.
Sequence Caution Sequence=BAB10227.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; Sequence=BX841652; Type=Miscellaneous discrepancy; Note=Sequencing errors.; Evidence={ECO:0000305};
Similarity Belongs to the HD-ZIP homeobox family. Class IV subfamily. {ECO:0000305}.
Similarity Contains 1 homeobox DNA-binding domain. {ECO:0000255|PROSITE-ProRule:PRU00108}.
Similarity Contains 1 START domain. {ECO:0000255|PROSITE- ProRule:PRU00197}.
Subcellular Location Nucleus {ECO:0000305}.
Tissue Specificity Expressed in shoot apical meristem (SAM) with higher levels in L1 cells and the epidermal layer of young leaves. Expressed in the L1 of apical inflorescence meristems, early flower primordia, carpel and stamen filament epidermis, ovule primordia, nucellus and chalaze. {ECO:0000269|PubMed:16778018}.

Identical and Related Proteins

Unique RefSeq proteins for LMP010480 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
334188232 RefSeq NP_199499 826 homeobox-leucine zipper protein HDG5

Identical Sequences to LMP010480 proteins

Reference Database Accession Length Protein Name
GI:334188232 gnl TAIR 826 homeobox-leucine zipper protein HDG5 [Arabidopsis thaliana]
GI:334188232 SwissProt Q9FJS2.3 826 RecName: Full=Homeobox-leucine zipper protein HDG5; AltName: Full=HD-ZIP protein HDG5; AltName: Full=Homeodomain GLABRA 2-like protein 5; AltName: Full=Homeodomain transcription factor HDG5; AltName: Full=Protein HOMEODOMAIN GLABROUS 5 [Arabidopsis thaliana]

Related Sequences to LMP010480 proteins

Reference Database Accession Length Protein Name
GI:334188232 GenBank ABP32645.1 794 Sequence 244 from patent US 7196245
GI:334188232 GenBank ADF12950.1 794 Sequence 540 from patent US 7663025
GI:334188232 GenBank ADS94101.1 794 Sequence 244 from patent US 7825296
GI:334188232 GenBank AEI22659.1 794 Sequence 250 from patent US 7960612
GI:334188232 GenBank AEQ40487.1 794 Sequence 1052 from patent US 8030546
GI:334188232 GenBank AGX49192.1 794 Sequence 244 from patent US 8541665