Gene/Proteome Database (LMPD)

LMPD ID
LMP010481
Gene ID
828658
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
homeobox-leucine zipper protein HDG6
Gene Symbol
FWA
Synonyms
FLOWERING WAGENINGEN; FWA; HDG6; HOMEODOMAIN GLABROUS 6; M7J2.100; M7J2_100
Chromosome
4
Summary
Encodes a homeodomain-containing transcription factor that controls flowering. FWA is silenced in wild type plants and reverse of the imprinted silencing causes a late flowering phenotype. FWA gene contains two tandem repeats around the transcription start site that are necessary and sufficient for silencing via DNA methylation.
Orthologs
View orthologs and multiple alignments for FWA

Proteins

homeobox-leucine zipper protein HDG6
Refseq ID NP_567722
Protein GI 18416569
UniProt ID Q9FVI6
mRNA ID NM_118685
Length 686
RefSeq Status REVIEWED
MNGQGDLDAVGNIPKPGEAEGDEIDMINDMSGVNDQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATNCGDTEYEVQKLMAENANLEREIDQFNSRYLSHPKQRMVSTSEQAPSSSSNPGINATPVLDFSGGTRTSEKETSIFLNLAITALRELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVTKPPGQIVEASRAKGLVPMTCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPLVPKRKVTFIRYCKEIRQGLWVVVDVTPTQNPTLLPYGCSKRLPSGLIIDDLSNGYSQVTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLTEISPGLSAKGATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENVAQNMSFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFAFISHLSFRHEWDILTNDTTMEETIRIQKAKRHGNIISLLKIVNNGMLVLQEIWNDASGAMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVPDGVNGSYHRGNTGGGCLLTFGLQILVGINPTAALIQGTVKSVETLMAHTIVKIKSALDLQT

Gene Information

Entrez Gene ID
828658
Gene Name
homeobox-leucine zipper protein HDG6
Gene Symbol
FWA
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-SubCell C nucleus
GO:0003677 IEA:UniProtKB-KW F DNA binding
GO:0008289 IEA:InterPro F lipid binding

Domain Information

InterPro Annotations

Accession Description
IPR001356 Homeobox domain
IPR009057 Homeodomain-like
IPR002913 START_lipid-bd_dom

UniProt Annotations

Entry Information

Gene Name
homeobox-leucine zipper protein HDG6
Protein Entry
FWA_ARATH
UniProt ID
Q9FVI6
Species
Arabidopsis

Comments

Comment Type Description
Similarity Contains START domain.
Subcellular Location Nucleus .

Identical and Related Proteins

Unique RefSeq proteins for LMP010481 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
18416569 RefSeq NP_567722 686 homeobox-leucine zipper protein HDG6

Identical Sequences to LMP010481 proteins

Reference Database Accession Length Protein Name
GI:18416569 DBBJ BAG68843.1 686 homeodomain-containing transcription factor FWA [Arabidopsis suecica]
GI:18416569 DBBJ BAG68820.1 686 homeodomain-containing transcription factor FWA [Arabidopsis thaliana]
GI:18416569 DBBJ BAG68824.1 686 homeodomain-containing transcription factor FWA [Arabidopsis thaliana]
GI:18416569 DBBJ BAG68828.1 686 homeodomain-containing transcription factor FWA [Arabidopsis thaliana]
GI:18416569 GenBank AEE85074.1 686 homeobox-leucine zipper protein HDG6 [Arabidopsis thaliana]
GI:18416569 GenBank AEQ40138.1 686 Sequence 354 from patent US 8030546

Related Sequences to LMP010481 proteins

Reference Database Accession Length Protein Name
GI:18416569 EMBL CAC27274.1 686 unnamed protein product [synthetic construct]
GI:18416569 GenBank AAG09302.1 686 homeobox protein [Arabidopsis thaliana]
GI:18416569 GenBank AAK28350.1 686 homeodomain-containing transcription factor FWA [Arabidopsis thaliana]
GI:18416569 GenBank ACC28691.1 686 Sequence 276 from patent US 7345217
GI:18416569 GenBank ADS94027.1 686 Sequence 96 from patent US 7825296
GI:18416569 GenBank AGX49118.1 686 Sequence 96 from patent US 8541665