Gene/Proteome Database (LMPD)

LMPD ID
LMP010484
Gene ID
831598
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
homeobox-leucine zipper protein HDG9
Gene Symbol
HDG9
Synonyms
homeodomain GLABROUS 9; MKP11.28; MKP11_28
Alternate Names
homeobox-leucine zipper protein HDG9
Chromosome
5

Proteins

homeobox-leucine zipper protein HDG9
Refseq ID NP_197234
Protein GI 15237948
UniProt ID Q9FFI0
mRNA ID NM_121738
Length 718
RefSeq Status REVIEWED
MDFTRDDNSSDERENDVDANTNNRHEKKGYHRHTNEQIHRLETYFKECPHPDEFQRRLLGEELNLKPKQIKFWFQNKRTQAKSHNEKADNAALRAENIKIRRENESMEDALNNVVCPPCGGRGPGREDQLRHLQKLRAQNAYLKDEYERVSNYLKQYGGHSMHNVEATPYLHGPSNHASTSKNRPALYGTSSNRLPEPSSIFRGPYTRGNMNTTAPPQPRKPLEMQNFQPLSQLEKIAMLEAAEKAVSEVLSLIQMDDTMWKKSSIDDRLVIDPGLYEKYFTKTNTNGRPESSKDVVVVQMDAGNLIDIFLTAEKWARLFPTIVNEAKTIHVLDSVDHRGKTFSRVIYEQLHILSPLVPPREFMILRTCQQIEDNVWMIADVSCHLPNIEFDLSFPICTKRPSGVLIQALPHGFSKVTWIEHVVVNDNRVRPHKLYRDLLYGGFGYGARRWTVTLERTCERLIFSTSVPALPNNDNPGVVQTIRGRNSVMHLGERMLRNFAWMMKMVNKLDFSPQSETNNSGIRIGVRINNEAGQPPGLIVCAGSSLSLPLPPVQVYDFLKNLEVRHQWDVLCHGNPATEAARFVTGSNPRNTVSFLEPSIRDINTKLMILQDSFKDALGGMVAYAPMDLNTACAAISGDIDPTTIPILPSGFMISRDGRPSEGEAEGGSYTLLTVAFQILVSGPSYSPDTNLEVSATTVNTLISSTVQRIKAMLKCE

Gene Information

Entrez Gene ID
831598
Gene Name
homeobox-leucine zipper protein HDG9
Gene Symbol
HDG9
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0008289 IEA:InterPro F lipid binding
GO:0043565 IDA:TAIR F sequence-specific DNA binding
GO:0003700 ISS:TAIR F sequence-specific DNA binding transcription factor activity
GO:0006351 IEA:UniProtKB-KW P transcription, DNA-templated

Domain Information

InterPro Annotations

Accession Description
IPR001356 Homeobox domain
IPR009057 Homeodomain-like
IPR023393 START-like domain
IPR002913 START_lipid-bd_dom

UniProt Annotations

Entry Information

Gene Name
homeobox-leucine zipper protein HDG9
Protein Entry
HDG9_ARATH
UniProt ID
Q9FFI0
Species
Arabidopsis

Comments

Comment Type Description
Function Probable transcription factor that binds to the DNA sequence 5'-GCATTAAATGCGCA-3'. {ECO:0000269|PubMed:16778018}.
Similarity Belongs to the HD-ZIP homeobox family. Class IV subfamily. {ECO:0000305}.
Similarity Contains 1 homeobox DNA-binding domain. {ECO:0000255|PROSITE-ProRule:PRU00108}.
Similarity Contains 1 START domain. {ECO:0000255|PROSITE- ProRule:PRU00197}.
Subcellular Location Nucleus {ECO:0000305}.
Tissue Specificity Expressed in anthers with highest levels in the tapetum and pollen grains, and chalazal end of the embryo sac. {ECO:0000269|PubMed:16778018}.

Identical and Related Proteins

Unique RefSeq proteins for LMP010484 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
15237948 RefSeq NP_197234 718 homeobox-leucine zipper protein HDG9

Identical Sequences to LMP010484 proteins

Reference Database Accession Length Protein Name
GI:15237948 GenBank ADC19266.1 718 Sequence 1030 from patent US 7635800
GI:15237948 GenBank ADF08007.1 718 Sequence 2338 from patent US 7659446
GI:15237948 GenBank AFC08846.1 718 Sequence 2338 from patent US 8110725
GI:15237948 GenBank AGM80832.1 718 Sequence 2338 from patent US 8426678
GI:15237948 GenBank AGM83362.1 718 Sequence 1030 from patent US 8426685
GI:15237948 gnl TAIR 718 homeobox-leucine zipper protein HDG9 [Arabidopsis thaliana]

Related Sequences to LMP010484 proteins

Reference Database Accession Length Protein Name
GI:15237948 GenBank EOA19553.1 724 hypothetical protein CARUB_v10002574mg [Capsella rubella]
GI:15237948 RefSeq XP_006286655.1 724 hypothetical protein CARUB_v10002574mg [Capsella rubella]
GI:15237948 RefSeq XP_010453918.1 721 PREDICTED: homeobox-leucine zipper protein HDG9-like [Camelina sativa]
GI:15237948 RefSeq XP_010461278.1 715 PREDICTED: homeobox-leucine zipper protein HDG10-like [Camelina sativa]
GI:15237948 RefSeq XP_010478910.1 714 PREDICTED: homeobox-leucine zipper protein HDG10-like [Camelina sativa]
GI:15237948 RefSeq XP_010492677.1 708 PREDICTED: homeobox-leucine zipper protein HDG9-like [Camelina sativa]