Gene/Proteome Database (LMPD)
LMPD ID
LMP010555
Gene ID
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
lipoxygenase 3
Gene Symbol
Synonyms
F28G4.10; lipoxygenase 3; LOX3
Alternate Names
lipoxygenase 3
Chromosome
1
EC Number
1.13.11.12
Summary
Lipoxygenase
Orthologs
Proteins
lipoxygenase 3 | |
---|---|
Refseq ID | NP_564021 |
Protein GI | 18394479 |
UniProt ID | Q9LNR3 |
mRNA ID | NM_101603 |
Length | 919 |
RefSeq Status | REVIEWED |
MALAKELMGYPLITERSSLVSSASHFKKRTQSTQFSINPFDRRPRKTKSGVVAAISEDLVKTLRFSTTTGDRKSEEEEKAAVKFKVRAVVTVRNKNKEDLKETLVKHLDAFADKIGRNIVLELISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAERVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIEGFALGPVHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGLRVLREKELKNLRGDGSGVRKLSDRIYDFDVYNDLGNPDKSSELSRPKLGGKEVPYPRRCRTGRQSTVSDKDAESRVEKPLPMYVPRDEQFEESKQDTFAAGRLKAVLHHLIPSLKASIVAEDFADFGEIDRLYKEGLLLKLGFQDDIFKKFPLPKVVVDTLQESTKGLLKYDTPKILSKDKNAWLRDDEFARQAIAGINPVNIERVKTFPPVSNLDPKIYGPQHSALTDDHIIGHLDGFSVQQALEENRLYMLDYHDIFLPFLDRINALDGRKAYATRTIFFLTRLGTLKPVAIELSLPPHGPKHRSKRVLTPPVDATSNWMWQLAKAHVSSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQSLISADGVIEGGFTAGAYGMEMSAAAYKSSWRFDMEGLPADLIRRGMAIPDATQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERYYPNPNLIKTDSELQSWYSESINVGHADLRDADWWPELSTVDDLVSILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEYASFISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPSIWTGDAEIVEAFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI |
Gene Information
Gene Ontology (GO Annotations)
GO ID | Source | Type | Description |
---|---|---|---|
GO:0009507 | IEA:UniProtKB-KW | C | chloroplast |
GO:0005506 | IEA:InterPro | F | iron ion binding |
GO:0016165 | IDA:UniProtKB | F | linoleate 13S-lipoxygenase activity |
GO:0009901 | IGI:TAIR | P | anther dehiscence |
GO:0048653 | IGI:TAIR | P | anther development |
GO:0034440 | IDA:TAIR | P | lipid oxidation |
GO:0031408 | IEA:UniProtKB-UniPathway | P | oxylipin biosynthetic process |
GO:0009555 | IGI:TAIR | P | pollen development |
GO:0009620 | IEP:TAIR | P | response to fungus |
GO:0009644 | IEP:UniProtKB | P | response to high light intensity |
GO:0009753 | IEP:UniProtKB | P | response to jasmonic acid |
GO:0009611 | IEP:UniProtKB | P | response to wounding |
GO:0080086 | IGI:TAIR | P | stamen filament development |
KEGG Pathway Links
KEGG Pathway ID | Description |
---|---|
ath00592 | alpha-Linolenic acid metabolism |
ath_M00113 | Jasmonic acid biosynthesis |
ath00591 | Linoleic acid metabolism |
REACTOME Pathway Links
REACTOME Pathway ID | Description |
---|---|
6254368 | Synthesis of Lipoxins (LX) |
Domain Information
InterPro Annotations
UniProt Annotations
Entry Information
Comments
Comment Type | Description |
---|---|
Catalytic Activity | Alpha-linolenate + O(2) = (9Z,11E,13S,15Z)-13- hydroperoxyoctadeca-9,11,15-trienoate. |
Catalytic Activity | Linoleate + O(2) = (9Z,11E,13S)-13- hydroperoxyoctadeca-9,11-dienoate. |
Cofactor | Name=Fe cation; Xref=ChEBI:CHEBI:24875; Evidence={ECO:0000255|PROSITE-ProRule:PRU00726}; Note=Binds 1 Fe cation per subunit. {ECO:0000255|PROSITE- ProRule:PRU00726}; |
Developmental Stage | First observed in lateral root primordia (LRP), from the first pericycle divisions. Later expressed in lateral roots. Expression is greatly increased in leaves during leaf senescence. {ECO:0000269|PubMed:11891244, ECO:0000269|PubMed:17369372}. |
Function | 13S-lipoxygenase that can use linolenic acid as substrates. Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure (By similarity). {ECO:0000250}. |
Induction | Induced by methyl jasmonate (MeJA), bacterial pathogens (e.g. Pseudomonas syringae pv. tomato), high light and wounding. {ECO:0000269|PubMed:17786451, ECO:0000269|PubMed:18156220, ECO:0000269|PubMed:18216250}. |
Pathway | Lipid metabolism; oxylipin biosynthesis. {ECO:0000255|PROSITE-ProRule:PRU00726}. |
Sequence Caution | Sequence=AAF97315.1; Type=Erroneous initiation; Evidence={ECO:0000305}; |
Similarity | Belongs to the lipoxygenase family. {ECO:0000305}. |
Similarity | Contains 1 lipoxygenase domain. {ECO:0000255|PROSITE- ProRule:PRU00726}. |
Similarity | Contains 1 PLAT domain. {ECO:0000255|PROSITE- ProRule:PRU00152}. |
Subcellular Location | Plastid, chloroplast {ECO:0000305}. |
Tissue Specificity | Expressed in roots and leaves. {ECO:0000269|PubMed:17369372}. |
Identical and Related Proteins
Unique RefSeq proteins for LMP010555 (as displayed in Record Overview)
Identical Sequences to LMP010555 proteins
Reference | Database | Accession | Length | Protein Name |
---|---|---|---|---|
GI:18394479 | GenBank | AAF79461.1 | 919 | F1L3.11 [Arabidopsis thaliana] |
GI:18394479 | GenBank | AAL91636.1 | 919 | At1g17420/F1L3_1 [Arabidopsis thaliana] |
GI:18394479 | GenBank | AAP21156.1 | 919 | At1g17420/F1L3_1 [Arabidopsis thaliana] |
GI:18394479 | GenBank | ADT59632.1 | 919 | Sequence 154 from patent US 7847156 |
GI:18394479 | GenBank | AEE29585.1 | 919 | lipoxygenase 3 [Arabidopsis thaliana] |
GI:18394479 | SwissProt | Q9LNR3.1 | 919 | RecName: Full=Lipoxygenase 3, chloroplastic; Short=AtLOX3; Flags: Precursor [Arabidopsis thaliana] |
Related Sequences to LMP010555 proteins
Reference | Database | Accession | Length | Protein Name |
---|---|---|---|---|
GI:18394479 | EMBL | CAB56692.1 | 919 | lipoxygenase [Arabidopsis thaliana] |
GI:18394479 | GenBank | AAF97315.1 | 912 | lipoxygenase [Arabidopsis thaliana] |
GI:18394479 | GenBank | EFH66483.1 | 919 | hypothetical protein ARALYDRAFT_471947 [Arabidopsis lyrata subsp. lyrata] |
GI:18394479 | RefSeq | XP_002890224.1 | 919 | hypothetical protein ARALYDRAFT_471947 [Arabidopsis lyrata subsp. lyrata] |
GI:18394479 | RefSeq | XP_006306718.1 | 921 | hypothetical protein CARUB_v10008244mg [Capsella rubella] |
GI:18394479 | RefSeq | XP_010476891.1 | 920 | PREDICTED: lipoxygenase 3, chloroplastic [Camelina sativa] |