Gene/Proteome Database (LMPD)

LMPD ID
LMP010983
Gene ID
835641
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
putative glycerophosphoryl diester phosphodiesterase 1
Gene Symbol
SVL1
Synonyms
MTE17.19; MTE17_19; SHV3-like 1; SVL1
Alternate Names
putative glycerophosphoryl diester phosphodiesterase 1
Chromosome
5
EC Number
3.1.4.46

Proteins

putative glycerophosphoryl diester phosphodiesterase 1
Refseq ID NP_200359
Protein GI 15240520
UniProt ID Q9FJ62
mRNA ID NM_124930
Length 766
RefSeq Status REVIEWED
MINMRDNPTMHVLQASKFLFLALILIQLLSTQLFAQRSKSPWQTLTGDAPLVIARGGFSGLLPDSSLDAYSFVSQTSVPGAVLWCDVQLTKDAIGLCFPDVKMMNASNIQDVYPKRKTSYLLNGVPTQDWFTIDFNFKDLTKVILKQGILSRSAAFDGNSYGISTVKDISTQLKPEGFWLNVQHDAFYAQHNLSMSSFLLSISKTVIIDYLSSPEVNFFRNIGRRFGRNGPKFVFRFLEKDDVEVSTNQTYGSLAGNLTFLKTFASGVLVPKSYIWPIESQYLLPRTSFVQDAHKAGLEVYASGFGNDFDLAYNYSFDPLAEYLSFMDNGDFSVDGLLSDFPLTASSAVDCFSHLGSNASSQVDFLVISKNGASGDYPGCTDLAYTKAIKDGADVIDCSLQMSSDGIPFCLSSINLGESTNVVQSPFRNRSTTVPEIGSLPGIYSFSLAWSEIQTLRPAIENPYSREFTMFRNPRERSSGKFVSLSDFLNLAKNSSSLTGVLISVENATYLREKQGLDAVKAVLDTLTEAGYSNKTTTTRVMIQSTNSSVLIDFKKQSRYETVYKVEETIRDILDTAIEDIKKFADAVVISKKSVFPTSESFTTGQTKLVERLQKFQLPVYVEVFRNEFVSQPWDFFADATVEINSHVTGAGINGTITEFPLTAARYKRNSCLTRKDVPPYMIPVQPAGLLTIVSPASLPPAEAPSPVFTDADVTEPPLPPVSARAPTTTPGPQSTGEKSPNGQTRVALSLLLSAFATVFASLLLL

Gene Information

Entrez Gene ID
835641
Gene Name
putative glycerophosphoryl diester phosphodiesterase 1
Gene Symbol
SVL1
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0031225 TAS:TAIR C anchored component of membrane
GO:0046658 IDA:TAIR C anchored component of plasma membrane
GO:0005886 IDA:TAIR C plasma membrane
GO:0009506 IDA:TAIR C plasmodesma
GO:0008889 IEA:UniProtKB-EC F glycerophosphodiester phosphodiesterase activity
GO:0006071 IEA:UniProtKB-KW P glycerol metabolic process
GO:0010442 IGI:TAIR P guard cell morphogenesis
GO:0006629 IEA:InterPro P lipid metabolic process
GO:0052541 IGI:TAIR P plant-type cell wall cellulose metabolic process
GO:0010026 IGI:TAIR P trichome differentiation

Domain Information

InterPro Annotations

Accession Description
IPR004129 Glycerophosphoryl diester phosphodiesterase
IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain

UniProt Annotations

Entry Information

Gene Name
putative glycerophosphoryl diester phosphodiesterase 1
Protein Entry
GPDL4_ARATH
UniProt ID
Q9FJ62
Species
Arabidopsis

Comments

Comment Type Description
Catalytic Activity A glycerophosphodiester + H(2)O = an alcohol + sn-glycerol 3-phosphate. {ECO:0000250|UniProtKB:Q7Y208}.
Function Involved in primary cell wall organization. Required for the accumulation of crystalline cellulose. {ECO:0000269|PubMed:18718934}.
Similarity Belongs to the glycerophosphoryl diester phosphodiesterase family. {ECO:0000305}.
Similarity Contains 2 GP-PDE domains. {ECO:0000305}.
Subcellular Location Cell membrane; Lipid-anchor, GPI-anchor {ECO:0000269|PubMed:12805588, ECO:0000269|PubMed:14517339, ECO:0000269|PubMed:16602701}.
Tissue Specificity Expressed in roots, leaves, stems, flowers and siliques. {ECO:0000269|PubMed:18718934, ECO:0000269|PubMed:21323773}.

Identical and Related Proteins

Unique RefSeq proteins for LMP010983 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
15240520 RefSeq NP_200359 766 putative glycerophosphoryl diester phosphodiesterase 1

Identical Sequences to LMP010983 proteins

Reference Database Accession Length Protein Name
GI:15240520 EMBL CBC06267.1 766 unnamed protein product [Arabidopsis thaliana]
GI:15240520 EMBL CBC38091.1 766 unnamed protein product [Arabidopsis thaliana]
GI:15240520 EMBL CBD13957.1 766 unnamed protein product [Arabidopsis thaliana]
GI:15240520 EMBL CBC76165.1 766 unnamed protein product [Arabidopsis thaliana]
GI:15240520 EMBL CBD35373.1 766 unnamed protein product [Arabidopsis thaliana]
GI:15240520 gnl TAIR 766 putative glycerophosphoryl diester phosphodiesterase 1 [Arabidopsis thaliana]

Related Sequences to LMP010983 proteins

Reference Database Accession Length Protein Name
GI:15240520 GenBank EFH40654.1 757 glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis lyrata subsp. lyrata]
GI:15240520 RefSeq XP_002864395.1 757 glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis lyrata subsp. lyrata]
GI:15240520 RefSeq XP_010449676.1 767 PREDICTED: glycerophosphodiester phosphodiesterase GDPDL4-like isoform X1 [Camelina sativa]
GI:15240520 RefSeq XP_010449685.1 767 PREDICTED: glycerophosphodiester phosphodiesterase GDPDL4-like isoform X2 [Camelina sativa]
GI:15240520 RefSeq XP_010443178.1 767 PREDICTED: glycerophosphodiester phosphodiesterase GDPDL4-like [Camelina sativa]
GI:15240520 RefSeq XP_010482994.1 769 PREDICTED: glycerophosphodiester phosphodiesterase GDPDL4 [Camelina sativa]