Gene/Proteome Database (LMPD)

LMPD ID
LMP011052
Gene ID
828383
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
putative sodium/metabolite cotransporter BASS6
Gene Symbol
AT4G22840
Synonyms
F7H19.20
Alternate Names
putative sodium/metabolite cotransporter BASS6
Chromosome
4

Proteins

putative sodium/metabolite cotransporter BASS6
Refseq ID NP_567671
Protein GI 18416020
UniProt ID Q8VYY4
mRNA ID NM_118413
Length 409
RefSeq Status REVIEWED
MSVITTPIETLHLKSTLRLLPRAVYRSQRIQVFPPNIFSNTSLSSPLRIDPISQVGGSRNLWRRYASDNFSEMGLDPGADPFKVIEKPSIVDRMKKANSILPHVVLASTILALIYPPSFTWFTSRYFVPALGFLMFAVGINSNEKDFLEAFKRPKAILLGYVGQYLVKPVLGFIFGLAAVSLFQLPTPIGAGIMLVSCVSGAQLSNYATFLTDPALAPLSIVMTSLSTATAVLVTPMLSLLLIGKKLPVDVKGMISSILQVVIAPIAAGLLLNKLFPKVSNAIRPFLPILSVLDTACCVGAPLALNINSVMSPFGATILLLVTMFHLSAFLAGYFLTGSVFRNAPDAKAMQRTLSYETGMQSSLLALALATKFFQDPLVGIPPAISTVVMSLMGFTLVLIWSKEKSNTF

Gene Information

Entrez Gene ID
828383
Gene Name
putative sodium/metabolite cotransporter BASS6
Gene Symbol
AT4G22840
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0009941 IDA:UniProtKB C chloroplast envelope
GO:0016021 IEA:UniProtKB-KW C integral component of membrane
GO:0008508 IEA:InterPro F bile acid:sodium symporter activity

REACTOME Pathway Links

REACTOME Pathway ID Description
6253667 SLC-mediated transmembrane transport
6253668 Transmembrane transport of small molecules
6254194 Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds

Domain Information

InterPro Annotations

Accession Description
IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3

UniProt Annotations

Entry Information

Gene Name
putative sodium/metabolite cotransporter BASS6
Protein Entry
BASS6_ARATH
UniProt ID
Q8VYY4
Species
Arabidopsis

Comments

Comment Type Description
Function May function as sodium-coupled metabolite transporter across the chloroplast envelope. {ECO:0000250}.
Sequence Caution Sequence=CAA16569.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; Sequence=CAA19799.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; Sequence=CAB79239.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
Similarity Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family. {ECO:0000305}.
Subcellular Location Membrane {ECO:0000305|PubMed:19542295}; Multi-pass membrane protein {ECO:0000305|PubMed:19542295}. Plastid, chloroplast envelope {ECO:0000305|PubMed:19542295}.

Identical and Related Proteins

Unique RefSeq proteins for LMP011052 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
18416020 RefSeq NP_567671 409 putative sodium/metabolite cotransporter BASS6

Identical Sequences to LMP011052 proteins

Reference Database Accession Length Protein Name
GI:18416020 GenBank AAM67166.1 409 unknown [Arabidopsis thaliana]
GI:18416020 GenBank ACW86515.1 409 Sequence 2872 from patent US 7569389
GI:18416020 GenBank ACX16069.1 409 Sequence 43060 from patent US 7569389
GI:18416020 GenBank AEE84665.1 409 putative sodium/metabolite cotransporter BASS6 [Arabidopsis thaliana]
GI:18416020 GenBank AGD02986.1 409 Sequence 442 from patent US 8343764
GI:18416020 SwissProt Q8VYY4.1 409 RecName: Full=Probable sodium/metabolite cotransporter BASS6, chloroplastic; AltName: Full=Bile acid transporter 4; AltName: Full=Bile acid-sodium symporter family protein 6; Flags: Precursor [Arabidopsis thaliana]

Related Sequences to LMP011052 proteins

Reference Database Accession Length Protein Name
GI:18416020 EMBL CAA16569.1 460 predicted protein [Arabidopsis thaliana]
GI:18416020 EMBL CAA19799.1 460 putative protein [Arabidopsis thaliana]
GI:18416020 EMBL CAB79239.1 460 predicted protein [Arabidopsis thaliana]
GI:18416020 GenBank ACW86514.1 440 Sequence 2871 from patent US 7569389
GI:18416020 GenBank ACX16068.1 440 Sequence 43059 from patent US 7569389
GI:18416020 GenBank AGD35392.1 460 Sequence 32848 from patent US 8343764