Gene/Proteome Database (LMPD)
Proteins
| probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5 | |
|---|---|
| Refseq ID | NP_849706 |
| Protein GI | 334182849 |
| UniProt ID | F4IAW1 |
| mRNA ID | NM_179375 |
| Length | 371 |
| RefSeq Status | REVIEWED |
| MIIRRLRLQKWRLCEIEKSITQRKWFLVEQLGYLHNMNFDSDVESMRLPVTVKATKPSFLVIWIRYSSAASSPTVSLNPSGRLQQTLAGSVEVKGKSLHSGKFSTVKLNPEIAGAGRFFEFRSRFIPASIEFAQESPLCTTLLKDELKIRTVEHLLSALEAKGVDNCRIQIESESSDDREVEVPIFDGSAKEWVDAIQGVGINAAQNHDGESVEKMVAHVNKPVYVCKNDTFVAAFPALETRITCGIDFPQVPAIGCQWFSWRPIHESSFAKDIASSRTFCVYEEVERMREAGLIKGGSLDNAIVCSAEHGWMNPPLRFDDEACRHKILDLIGDLSLVSRGGNGGLPVAHIVAYKAGHALHTDLARHLTMD | |
| probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5 | |
|---|---|
| Refseq ID | NP_001117351 |
| Protein GI | 334182851 |
| UniProt ID | F4IAW2 |
| mRNA ID | NM_001123879 |
| Length | 311 |
| RefSeq Status | REVIEWED |
| MIIRRLRLQKWRLCEIEKSITQRKWFLVEQLGYLHNMNFDSDVESMRLPVTVKATKPSFLVIWIRYSSAASSPTVSLNPSGRLQQTLAGSVEVKGKSLHSGKFSTVKLNPEIAGAGRFFEFRSRFIPASIEFAQESPLCTTLLKDELKIRTVEHLLSALEAKGVDNCRIQIESESSDDREVEVPIFDGSAKEWVDAIQGVGINAAQNHDGESVEKMVAHVNKPVYVCKNDTFVAAFPALETRITCGIDFPQVPAIGCQWFSWRPIHESSFAKDIASSRTFCVYEEVERMREAGLIKGGSLDNAIVSLSMDG | |
Gene Information
Entrez Gene ID
Gene Name
probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5
Gene Symbol
Species
Arabidopsis thaliana
Gene Ontology (GO Annotations)
| GO ID | Source | Type | Description |
|---|---|---|---|
| GO:0005739 | IDA:UniProtKB | C | mitochondrion |
| GO:0008759 | IMP:UniProtKB | F | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | IEA:UniProtKB-KW | P | lipid A biosynthetic process |
| GO:2001289 | IMP:UniProtKB | P | lipid X metabolic process |
KEGG Pathway Links
| KEGG Pathway ID | Description |
|---|---|
| ath01100 | Metabolic pathways |
Domain Information
UniProt Annotations
Entry Information
Gene Name
probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5
Protein Entry
F4IAW2_ARATH
UniProt ID
Species
Arabidopsis
Comments
| Comment Type | Description |
|---|---|
| Alternative Products | Event=Alternative splicing; Named isoforms=1; Comment=A number of isoforms are produced. According to EST sequences.; Name=1; IsoId=F4IAW1-1; Sequence=Displayed; |
| Catalytic Activity | UDP-3-O-(3-hydroxytetradecanoyl)-N- acetylglucosamine + H(2)O = UDP-3-O-(3-hydroxytetradecanoyl)- glucosamine + acetate. |
| Function | Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that in bacteria anchors the lipopolysaccharide to the outer membrane of the cell. Lipid A-like molecules in plants may serve as structural components of the outer membranes of mitochondria and/or chloroplasts, or may be involved in signal transduction or plant defense responses (Potential). {ECO:0000305}. |
| Miscellaneous | Plants silencing LPXC do not have altered morphology compared to wild-type plants when grown under normal growth conditions, but they do not accumulate 2,3- diacylglucosamine-1-phosphate. {ECO:0000305|PubMed:21709257}. |
| Pathway | Glycolipid biosynthesis; lipid IV(A) biosynthesis; lipid IV(A) from (3R)-3-hydroxytetradecanoyl-[acyl-carrier-protein] and UDP-N-acetyl-alpha-D-glucosamine: step 2/6. {ECO:0000269|PubMed:21709257}. |
| Sequence Caution | Sequence=AAG28816.2; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At1g25210 and At1g25211.; Evidence={ECO:0000305}; Sequence=AEE30586.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; |
| Similarity | Belongs to the LpxC family. {ECO:0000305}. |
| Subcellular Location | Mitochondrion {ECO:0000269|PubMed:21709257}. |
Identical and Related Proteins
Unique RefSeq proteins for LMP011062 (as displayed in Record Overview)
| Protein GI | Database | Accession | Length | Protein Name |
|---|---|---|---|---|
| 334182849 | RefSeq | NP_849706 | 371 | probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5 |
| 334182851 | RefSeq | NP_001117351 | 311 | probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5 |
Identical Sequences to LMP011062 proteins
| Reference | Database | Accession | Length | Protein Name |
|---|---|---|---|---|
| GI:334182849 | GenBank | AEE30586.1 | 371 | probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5 [Arabidopsis thaliana] |
| GI:334182851 | GenBank | AEE30587.1 | 311 | probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5 [Arabidopsis thaliana] |
Related Sequences to LMP011062 proteins
| Reference | Database | Accession | Length | Protein Name |
|---|---|---|---|---|
| GI:334182851 | GenBank | AAG03130.1 | 955 | F5A9.4 [Arabidopsis thaliana] |
| GI:334182851 | GenBank | AAM19808.1 | 266 | At1g25190/F4F7_4 [Arabidopsis thaliana] |
| GI:334182849 | GenBank | AEE30562.1 | 326 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| GI:334182851 | GenBank | AEE30563.1 | 266 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| GI:334182849 | GenBank | AEE30567.1 | 369 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| GI:334182849 | GenBank | AEE30573.1 | 369 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| GI:334182851 | GenBank | AEE30586.1 | 371 | probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5 [Arabidopsis thaliana] |
| GI:334182849 | RefSeq | NP_173874.2 | 326 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| GI:334182851 | RefSeq | NP_001154365.1 | 266 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| GI:334182849 | RefSeq | NP_173884.5 | 369 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| GI:334182849 | RefSeq | NP_173878.6 | 369 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| GI:334182851 | RefSeq | NP_849706.3 | 371 | probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 5 [Arabidopsis thaliana] |