Gene/Proteome Database (LMPD)

LMPD ID
LMP012056
Gene ID
559245
Species
Danio rerio (Zebrafish)
Gene Name
RAR-related orphan receptor C a
Gene Symbol
rorca
Synonyms
rorc; rorg
Chromosome
8

Proteins

RAR-related orphan receptor C a
Refseq ID NP_001076288
Protein GI 130493601
UniProt ID A3R3K0
mRNA ID NM_001082819
Length 479
RefSeq Status PROVISIONAL
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCIIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQERAGGLGNGISSHTGDEAGENGNGHSRAYSRGSSTTLSDLDDITTLPDGLLFDLPLTPEEAADYCSLELLGGSSGNSSSSQSSPESNRQEFGDVTHIKHEYMSPHESGLFTRSILNPPEGCSLMEIERITQNVIKSHIETSQYSTEELKRLAWTLYTPEEIRVYQNKPTEMLWQQCAVQLTNAIQYVVEFAKRISGFMDLSQNDQIILLKAGCLDVLLIRMCRAYNPINNTLLFDGKFASPQLFKALGCDDLVSAVFEMAKTLSRLQLSGEEMALFTATVLLSPDRPWLTDAQKVQKLQEKVYVALQHYLHKSGVHEEKLARMVSKLPMMKSICNLHIDKLEFFRLLHPETAYNFPALYREVFCSEITFPDSTEG

Gene Information

Entrez Gene ID
559245
Gene Name
RAR-related orphan receptor C a
Gene Symbol
rorca
Species
Danio rerio

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0004879 IEA:InterPro F ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0003707 IEA:InterPro F steroid hormone receptor activity
GO:0008270 IEA:InterPro F zinc ion binding

Domain Information

InterPro Annotations

Accession Description
IPR008946 Nuclear hormone receptor, ligand-binding
IPR000536 Nuclear hormone receptor, ligand-binding, core
IPR003079 ROR_rcpt
IPR001723 Steroid hormone receptor
IPR013088 Zinc finger, NHR/GATA-type
IPR001628 Zinc finger, nuclear hormone receptor-type

UniProt Annotations

Entry Information

Gene Name
RAR-related orphan receptor C a
Protein Entry
A3R3K0_DANRE
UniProt ID
A3R3K0
Species
Zebrafish

Comments

Comment Type Description
Similarity Belongs to the nuclear hormone receptor family.
Similarity Contains nuclear receptor DNA-binding domain.

Identical and Related Proteins

Unique RefSeq proteins for LMP012056 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
130493601 RefSeq NP_001076288 479 RAR-related orphan receptor C a

Identical Sequences to LMP012056 proteins

Reference Database Accession Length Protein Name
GI:130493601 GenBank ABO15414.1 479 retinoid-related orphan receptor c [Danio rerio]

Related Sequences to LMP012056 proteins

Reference Database Accession Length Protein Name
GI:130493601 GenBank AFC34773.1 479 RORgamma1 [Ctenopharyngodon idella]
GI:130493601 RefSeq XP_005932545.1 474 PREDICTED: nuclear receptor ROR-beta-like [Haplochromis burtoni]
GI:130493601 RefSeq XP_006790376.1 474 PREDICTED: nuclear receptor ROR-beta-like [Neolamprologus brichardi]
GI:130493601 RefSeq XP_007234847.1 483 PREDICTED: nuclear receptor ROR-beta-like [Astyanax mexicanus]
GI:130493601 RefSeq XP_007558718.1 474 PREDICTED: nuclear receptor ROR-beta-like [Poecilia formosa]
GI:130493601 RefSeq XP_008405301.1 474 PREDICTED: nuclear receptor ROR-beta-like [Poecilia reticulata]