Gene/Proteome Database (LMPD)

LMPD ID
LMP012113
Gene ID
564951
Species
Danio rerio (Zebrafish)
Gene Name
RAR-related orphan receptor A, paralog a
Gene Symbol
roraa
Synonyms
rora2; RORalpha-B; gb:dq017624
Chromosome
25

Proteins

nuclear receptor ROR-alpha
Refseq ID NP_001103637
Protein GI 164414403
UniProt ID A7VL70
mRNA ID NM_001110167
Length 468
RefSeq Status PROVISIONAL
MMYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLNRDHQQQPGEAEPLTPTYGLSTNGLTELHDDLSGYMNGHTPDGTKPDSGVSSFYLDIQPSPDQSGLDINGIKPEPICDFTPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFLQEEVENYQSKPREVMWQLCAIKITEAIQYVVEFAKHIDGFMELCQNDQIVLLKAGSLEVVFVRMCRAFDPQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG

Gene Information

Entrez Gene ID
564951
Gene Name
RAR-related orphan receptor A, paralog a
Gene Symbol
roraa
Species
Danio rerio

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0004879 IEA:InterPro F ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0003707 IEA:InterPro F steroid hormone receptor activity
GO:0008270 IEA:InterPro F zinc ion binding

Domain Information

InterPro Annotations

Accession Description
IPR008946 Nuclear hormone receptor, ligand-binding
IPR000536 Nuclear hormone receptor, ligand-binding, core
IPR003079 ROR_rcpt
IPR001723 Steroid hormone receptor
IPR013088 Zinc finger, NHR/GATA-type
IPR001628 Zinc finger, nuclear hormone receptor-type

UniProt Annotations

Entry Information

Gene Name
RAR-related orphan receptor A, paralog a
Protein Entry
A7VL70_DANRE
UniProt ID
A7VL70
Species
Zebrafish

Comments

Comment Type Description
Similarity Belongs to the nuclear hormone receptor family.
Similarity Contains nuclear receptor DNA-binding domain.

Identical and Related Proteins

Unique RefSeq proteins for LMP012113 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
164414403 RefSeq NP_001103637 468 nuclear receptor ROR-alpha

Identical Sequences to LMP012113 proteins

Reference Database Accession Length Protein Name
GI:164414403 DBBJ BAF76726.1 468 retinoid-related orphan receptor alpha 2 [Danio rerio]

Related Sequences to LMP012113 proteins

Reference Database Accession Length Protein Name
GI:164414403 GenBank AFC34772.1 468 RORalpha2 [Ctenopharyngodon idella]
GI:164414403 RefSeq XP_005470779.1 468 PREDICTED: nuclear receptor ROR-alpha-like isoform X2 [Oreochromis niloticus]
GI:164414403 RefSeq XP_005928797.1 468 PREDICTED: nuclear receptor ROR-alpha-like isoform X2 [Haplochromis burtoni]
GI:164414403 RefSeq XP_007556823.1 468 PREDICTED: nuclear receptor ROR-alpha isoform X2 [Poecilia formosa]
GI:164414403 RefSeq XP_008280365.1 468 PREDICTED: nuclear receptor ROR-alpha isoform X2 [Stegastes partitus]
GI:164414403 RefSeq XP_008410498.1 468 PREDICTED: nuclear receptor ROR-alpha isoform X2 [Poecilia reticulata]