Gene/Proteome Database (LMPD)
LMPD ID
LMP012353
Gene ID
Species
Homo sapiens (Human)
Gene Name
glycerol-3-phosphate dehydrogenase 1-like
Gene Symbol
Synonyms
GPD1-L;
Chromosome
3
Map Location
3p22.3
EC Number
1.1.1.8;
Summary
The protein encoded by this gene catalyzes the conversion of sn-glycerol 3-phosphate to glycerone phosphate. The encoded protein is found in the cytoplasm, associated with the plasma membrane, where it binds the sodium channel, voltage-gated, type V, alpha subunit (SCN5A). Defects in this gene are a cause of Brugada syndrome type 2 (BRS2) as well as sudden infant death syndrome (SIDS). [provided by RefSeq, Jul 2010]
Orthologs
Proteins
glycerol-3-phosphate dehydrogenase 1-like protein | |
---|---|
Refseq ID | NP_055956 |
Protein GI | 24307999 |
UniProt ID | Q8N335 |
mRNA ID | NM_015141 |
Length | 351 |
MAAAPLKVCIVGSGNWGSAVAKIIGNNVKKLQKFASTVKMWVFEETVNGRKLTDIINNDHENVKYLPGHKLPENVVAMSNLSEAVQDADLLVFVIPHQFIHRICDEITGRVPKKALGITLIKGIDEGPEGLKLISDIIREKMGIDISVLMGANIANEVAAEKFCETTIGSKVMENGLLFKELLQTPNFRITVVDDADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAFARIFCKGQVSTATFLESCGVADLITTCYGGRNRRVAEAFARTGKTIEELEKEMLNGQKLQGPQTSAEVYRILKQKGLLDKFPLFTAVYQICYESRPVQEMLSCLQSHPEHT |
Gene Information
Entrez Gene ID
Gene Name
glycerol-3-phosphate dehydrogenase 1-like
Gene Symbol
Species
Homo sapiens
Gene Ontology (GO Annotations)
GO ID | Source | Type | Description |
---|---|---|---|
GO:0005829 | TAS:Reactome | C | cytosol |
GO:0070062 | IDA:UniProtKB | C | extracellular vesicular exosome |
GO:0009331 | IEA:InterPro | C | glycerol-3-phosphate dehydrogenase complex |
GO:0005886 | IDA:BHF-UCL | C | plasma membrane |
GO:0051287 | IEA:InterPro | F | NAD binding |
GO:0004367 | IEA:UniProtKB-EC | F | glycerol-3-phosphate dehydrogenase [NAD+] activity |
GO:0044325 | IPI:BHF-UCL | F | ion channel binding |
GO:0017080 | IMP:BHF-UCL | F | sodium channel regulator activity |
GO:0019674 | IMP:BHF-UCL | P | NAD metabolic process |
GO:0006734 | IEA:Ensembl | P | NADH metabolic process |
GO:0005975 | IEA:InterPro | P | carbohydrate metabolic process |
GO:0044255 | TAS:Reactome | P | cellular lipid metabolic process |
GO:0046168 | IEA:InterPro | P | glycerol-3-phosphate catabolic process |
GO:0046474 | TAS:Reactome | P | glycerophospholipid biosynthetic process |
GO:0033137 | IMP:BHF-UCL | P | negative regulation of peptidyl-serine phosphorylation |
GO:0090038 | IMP:BHF-UCL | P | negative regulation of protein kinase C signaling |
GO:0006654 | TAS:Reactome | P | phosphatidic acid biosynthetic process |
GO:0006644 | TAS:Reactome | P | phospholipid metabolic process |
GO:2000010 | IMP:BHF-UCL | P | positive regulation of protein localization to cell surface |
GO:0010765 | IMP:BHF-UCL | P | positive regulation of sodium ion transport |
GO:0002027 | IMP:BHF-UCL | P | regulation of heart rate |
GO:2000649 | IMP:BHF-UCL | P | regulation of sodium ion transmembrane transporter activity |
GO:0060373 | IMP:BHF-UCL | P | regulation of ventricular cardiac muscle cell membrane depolarization |
GO:0044281 | TAS:Reactome | P | small molecule metabolic process |
GO:0019432 | TAS:Reactome | P | triglyceride biosynthetic process |
GO:0086005 | IMP:BHF-UCL | P | ventricular cardiac muscle cell action potential |
KEGG Pathway Links
KEGG Pathway ID | Description |
---|---|
hsa00564 | Glycerophospholipid metabolism |
ko00564 | Glycerophospholipid metabolism |
REACTOME Pathway Links
REACTOME Pathway ID | Description |
---|---|
REACT_22279 | Fatty acid, triacylglycerol, and ketone body metabolism |
REACT_121401 | Glycerophospholipid biosynthesis |
REACT_111217 | Metabolism |
REACT_22258 | Metabolism of lipids and lipoproteins |
REACT_120870 | Phospholipid metabolism |
REACT_120906 | Synthesis of PA |
REACT_1190 | Triglyceride Biosynthesis |
Domain Information
InterPro Annotations
Accession | Description |
---|---|
IPR008927 | 6-phosphogluconate dehydrogenase, C-terminal-like |
IPR013328 | Dehydrogenase, multihelical |
IPR006168 | Glycerol-3-phosphate dehydrogenase, NAD-dependent |
IPR006109 | Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal |
IPR011128 | Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal |
IPR017751 | Glycerol-3-phosphate dehydrogenase, NAD-dependent, eukaryotic |
IPR016040 | NAD(P)-binding domain |
UniProt Annotations
Entry Information
Comments
Comment Type | Description |
---|---|
Catalytic Activity | sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. |
Disease | Brugada syndrome 2 (BRGDA2) [MIM:611777]: A tachyarrhythmia characterized by right bundle branch block and ST segment elevation on an electrocardiogram (ECG). It can cause the ventricles to beat so fast that the blood is prevented from circulating efficiently in the body. When this situation occurs, the individual will faint and may die in a few minutes if the heart is not reset Note=The disease is caused by mutations affecting the gene represented in this entry. |
Disease | Sudden infant death syndrome (SIDS) [MIM:272120]: SIDS is the sudden death of an infant younger than 1 year that remains unexplained after a thorough case investigation, including performance of a complete autopsy, examination of the death scene, and review of clinical history. Pathophysiologic mechanisms for SIDS may include respiratory dysfunction, cardiac dysrhythmias, cardiorespiratory instability, and inborn errors of metabolism, but definitive pathogenic mechanisms precipitating an infant sudden death remain elusive Note=Disease susceptibility is associated with variations affecting the gene represented in this entry. |
Function | Plays a role in regulating cardiac sodium current; decreased enzymatic activity with resulting increased levels of glycerol 3-phosphate activating the DPD1L-dependent SCN5A phosphorylation pathway, may ultimately lead to decreased sodium current; cardiac sodium current may also be reduced due to alterations of NAD(H) balance induced by DPD1L |
Sequence Caution | Sequence=BAA07648.1; Type=Erroneous initiation; Evidence= ; |
Similarity | Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family |
Subcellular Location | Cytoplasm Note=Localized to the region of the plasma membrane. |
Subunit | Interacts with SCN5A. {ECO:0000269|PubMed:19666841, ECO:0000269|Ref.8}. |
Tissue Specificity | Most highly expressed in heart tissue, with lower levels in the skeletal muscle, kidney, lung and other organs |
Identical and Related Proteins
Unique RefSeq proteins for LMP012353 (as displayed in Record Overview)
Protein GI | Database | Accession | Length | Protein Name |
---|---|---|---|---|
24307999 | RefSeq | NP_055956 | 351 | glycerol-3-phosphate dehydrogenase 1-like protein |
Identical Sequences to LMP012353 proteins
Reference | Database | Accession | Length | Protein Name |
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Related Sequences to LMP012353 proteins
Reference | Database | Accession | Length | Protein Name |
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