Gene/Proteome Database (LMPD)

LMPD ID
LMP013222
Gene ID
303313
Species
Rattus norvegicus (Rat)
Gene Name
scavenger receptor class F, member 1
Gene Symbol
Scarf1
Alternate Names
scavenger receptor class F member 1; endothelial cells scavenger receptor;
Chromosome
10
Map Location
10q24

Proteins

scavenger receptor class F member 1 precursor
Refseq ID NP_001100492
Protein GI 157822945
UniProt ID D3ZPE8
mRNA ID NM_001107022
Length 823
MLTAMGLGLVFSLLLFWTREIQGSTLDPAGQHVCIGSSPSELQCCSGWRQKDQECTIPICEGPDACKKDEVCVKPGLCRCKPGFFGAHCSSRCPGQYWGPDCRETCPCHPRGQCEPATGVCQCQPNYWGKLCEFPCTCGPHGKCDPKTGLCHCDPGWWSPTCRRPCQCNPLARCDQVTGACICPTGWWGHRCSFSCNCHTSPCLQDSGRCTCLQGWWGPECSRRCQCVRGQCSVTSGHCSCPPGFQGALCELPCKPGRYGAQCKESCGHCEPNATCSPVTGNCESCKPGWNGTQCKQPCPPGTFGERCTGKCPRCRLEEPCQVETGHCQRCDPGWLGHRCEKPCPLGTFGKGCSSTCPACVQGTCNAVTGECVCSAGYWGTSCNSSCPSGFHGNNCSMPCQCPEGLCHPESGACQLGPHGKNALIVGILVPLLLLLMGIICCVYCCSASRLDPKDRPERNGAAFFRMKQQVWGALTSLGSALPCGSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGEEDEAHAYFMPPREETVPMTQEESPAASLPGGPFPPPEDASTPFPIPRTSSLARAKRPSVSFAEGTKFAPQNGRSSGDLSSPIRKPKRLSRGAQPRPEGQEAEESTGPEQENPEEDVPTATSSGDAATSHGQLPPGSRTVTECVETTDGGIQESSGSVATIYMLAGTPQKPEGPVWSVFRRLGNYQKDQAAPKVKSAIPKPLRRSLGRNQASSGLSQSSGSAPGAVLSGAMESTAVKPEEASRGLGDGIESLGTVQEPVVGSSSPEQGSQKQAEEQEQEEPLYENVVPMLQH
sig_peptide: 1..23 inference: COORDINATES: ab initio prediction:SignalP:4.0 calculated_mol_wt: 2597 peptide sequence: MLTAMGLGLVFSLLLFWTREIQG

Gene Information

Entrez Gene ID
303313
Gene Name
scavenger receptor class F, member 1
Gene Symbol
Scarf1
Species
Rattus norvegicus

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0016021 IEA:Ensembl C integral component of membrane
GO:0030169 IEA:Ensembl F low-density lipoprotein particle binding
GO:0005044 IEA:Ensembl F scavenger receptor activity
GO:0016358 IEA:Ensembl P dendrite development
GO:0016322 IEA:Ensembl P neuron remodeling
GO:0048680 IEA:Ensembl P positive regulation of axon regeneration

REACTOME Pathway Links

REACTOME Pathway ID Description
5954562 Binding and Uptake of Ligands by Scavenger Receptors
5954574 Scavenging by Class F Receptors

Domain Information

InterPro Annotations

Accession Description
IPR013032 EGF-like, conserved site
IPR002049 EGF-like, laminin
IPR000742 Epidermal growth factor-like domain
IPR009030 Insulin-like growth factor binding protein, N-terminal

UniProt Annotations

Entry Information

Gene Name
scavenger receptor class F, member 1
Protein Entry
D3ZPE8_RAT
UniProt ID
D3ZPE8
Species
Rat

Identical and Related Proteins

Unique RefSeq proteins for LMP013222 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
157822945 RefSeq NP_001100492 823 scavenger receptor class F member 1 precursor

Identical Sequences to LMP013222 proteins

Reference Database Accession Length Protein Name
GI:157822945 GenBank EDM05225.1 823 rCG35217 [Rattus norvegicus]

Related Sequences to LMP013222 proteins

Reference Database Accession Length Protein Name
GI:157822945 DBBJ BAD90140.1 827 mKIAA0149 protein, partial [Mus musculus]
GI:157822945 GenBank EDM05225.1 823 rCG35217 [Rattus norvegicus]
GI:157822945 RefSeq NP_001004157.2 820 scavenger receptor class F member 1 precursor [Mus musculus]
GI:157822945 SwissProt Q5ND28.1 820 RecName: Full=Scavenger receptor class F member 1; AltName: Full=Acetyl LDL receptor; AltName: Full=Scavenger receptor expressed by endothelial cells 1 protein; Short=SREC-I; Flags: Precursor [Mus musculus]