Gene/Proteome Database (LMPD)

LMPD ID
LMP013330
Gene ID
310836
Species
Rattus norvegicus (Rat)
Gene Name
ATP-binding cassette, subfamily A (ABC1), member 4
Gene Symbol
Abca4
Synonyms
ABCR;
Alternate Names
retinal-specific ATP-binding cassette transporter; ATP-binding cassette, sub-family A (ABC1), member 4;
Chromosome
2
Map Location
2q41

Proteins

retinal-specific ATP-binding cassette transporter
Refseq ID NP_001101191
Protein GI 157819513
UniProt ID D4AB29
mRNA ID NM_001107721
Length 2290
MGFLRQIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNANPLYSQHECHFPNKAMPSAGMLPWLQGIFCNMNNPCFQNPTPGESPGTVSNYNNSILARLYRDFQELFMDTPEVQRLGRVWTELRTLSQLMDTLRTHPERFTGRGLPIRDILKDEETLTLFLKKNIGLSDSVAYLLVNSQVRMEQFAYGVPDLELKDIACSEALLQRFIIFSQRWGAQAVRGALCPLSQVTLQWIEDTLYADVDFFKLFRVLPTLLDSSSQGINLRFWGEILSDLSPRVQKFIHRPSVQDLLWVTRPLLQNSGPETFTQLMGILSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRRDPTYSYDKRTTWRATKPLLMGKILFTPDSPAARRLLKNANSTFEELDRVRKLVKAWEEVGPQIWYFFEKSTQMAVIRDTLQHPTVKDFINRQLGEEGITTEAILNFFPNGPRENQADDMTSFDWRDIFNITDRFLRLANQYLECLVLDKFESYDDEVQLTQRALSLLEENRFWAGVVFPDMYPWTSSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVEDFRYIWGGFAYLQDMVEQGIVRSQTPAEPPIGVYLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKGIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMSMSIFLLTLFIMHGRILHYSDPFILFLFLLAFATATIMQCFLFSTFFSKASLAAACSGVIYFTLYLPHILCFAWQDRMTADLKTTVSLLSPVAFGFGTEYLVRFEEQGLGLQWSNIGKSPLEGDEFSFLLSMKMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPLTEEIEDPEYPEDSFFERELPGLVPGVCVKNLVKVFEPGSRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLIGGKDIEISLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEARLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSQRCGCEGACSCTSKGFSARCPARVDEITEEQVLDGDVKELTDLVYHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDSESGSKFVGGTQQKREHTGLRHPCSAPVEKHRQHAQASHTCSPGQVDPPKGQPSPEPEDPGIPFNTGARLILQHVQALLVKRFHHAVRSRKDFVAQIVLPATFVFLALMLSIIVPPFGEFPALTLHPWMYGHQFTFFSMDEPNNEHLEVLADVLLNRPGFGNRCLKEEWLPEYPCGNATSWKTPSVSPNITHLFQKQKWTAAHPSPACKCSTREKLIMLPECPEGAGGLPPPQRIQRSTEVLQDLTNRNISDYLVKTYPALIRSSLKSKFWVNEQRYGGISIGGKLPDIPISGEALVGFLSDLGQMMNVSGGPVTRESSREMLDFLKHLETKDNIKVWFNNKGWHALVSFLNVAHNAILRASLPKDRDPEEYGITVISQPLNLTKEQLSEITVLTTSIDAVVAICVIFAMSFVPASFVLYLIQERVTKAKHLQFISGVSPTTYWMTNFLWDIMNYAVSAGLVVGIFIGFQKKAYTSTDNLPALVTLLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITFVLELFENNRMLLRFSATLRELLIVFPHFCLGRGLIDLALSQAVTDIYAQFGEEYSANPFQWDLIGKNLVAMAIEGVVYFLLTLLIQHHFFLTRWIAEPAREPVFDEDDDVAEERQRVMSGGSKSDILKLNELTKVYSGSSSPAVDRLCVGVHPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATIAGKSILTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPSKEIEKVANWGIQSLGLSLYADRLAGTYSGGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVNIIRQGRAVVLTSHSMEECEALCTRLAIMVKGTFQCMGTIQHLKYKFGDGYIVTMKIKSPKDDLLPDLNPVEQFFQGNFPGSVQRERHHSMLQFQVPSSSLARIFQLLISHKDSLLIEEYSVTQTTLDQVFVNFAKQQTETYDLPLHPRAAGASWQAKLEGKSGRLETQEPLPAGSSEHLANINNPTAVADNKHTRSPQ

Gene Information

Entrez Gene ID
310836
Gene Name
ATP-binding cassette, subfamily A (ABC1), member 4
Gene Symbol
Abca4
Species
Rattus norvegicus

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005887 IEA:InterPro C integral component of plasma membrane
GO:0005524 IEA:UniProtKB-KW F ATP binding
GO:0042626 IEA:InterPro F ATPase activity, coupled to transmembrane movement of substances
GO:0004012 IEA:Ensembl F phospholipid-translocating ATPase activity
GO:0006649 IEA:Ensembl P phospholipid transfer to membrane
GO:0045494 IEA:Ensembl P photoreceptor cell maintenance
GO:0007601 IEA:Ensembl P visual perception

KEGG Pathway Links

KEGG Pathway ID Description
ko02010 ABC transporters
rno02010 ABC transporters

REACTOME Pathway Links

REACTOME Pathway ID Description
5954099 ABC-family proteins mediated transport
5953253 Disease
5953382 Diseases associated with visual transduction
5953381 Signal Transduction
5953384 The canonical retinoid cycle in rods (twilight vision)
5953265 Transmembrane transport of small molecules
5953380 Visual phototransduction

Domain Information

InterPro Annotations

Accession Description
IPR003593 AAA+ ATPase domain
IPR026082 ABC transporter A, ABCA
IPR017871 ABC transporter, conserved site
IPR003439 ABC_transporter-like
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR005951 Retinal-specific ATP-binding cassette transporter

UniProt Annotations

Entry Information

Gene Name
ATP-binding cassette, subfamily A (ABC1), member 4
Protein Entry
D4AB29_RAT
UniProt ID
D4AB29
Species
Rat

Identical and Related Proteins

Unique RefSeq proteins for LMP013330 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
157819513 RefSeq NP_001101191 2290 retinal-specific ATP-binding cassette transporter

Identical Sequences to LMP013330 proteins

Reference Database Accession Length Protein Name
GI:157819513 GenBank EDL82093.1 2290 ATP-binding cassette, sub-family A (ABC1), member 4 (predicted), isoform CRA_a [Rattus norvegicus]

Related Sequences to LMP013330 proteins

Reference Database Accession Length Protein Name
GI:157819513 GenBank EDL82093.1 2290 ATP-binding cassette, sub-family A (ABC1), member 4 (predicted), isoform CRA_a [Rattus norvegicus]
GI:157819513 RefSeq NP_031404.1 2310 retinal-specific ATP-binding cassette transporter [Mus musculus]
GI:157819513 RefSeq XP_006233304.1 2312 PREDICTED: retinal-specific ATP-binding cassette transporter isoform X1 [Rattus norvegicus]
GI:157819513 SwissProt O35600.1 2310 RecName: Full=Retinal-specific ATP-binding cassette transporter; AltName: Full=ATP-binding cassette sub-family A member 4; AltName: Full=RIM ABC transporter; Short=RIM protein; Short=RmP [Mus musculus]