Gene/Proteome Database (LMPD)

LMPD ID
LMP013623
Gene ID
680551
Species
Rattus norvegicus (Rat)
Gene Name
apolipoprotein C-IV
Gene Symbol
Apoc4
Synonyms
Acl;
Alternate Names
apolipoprotein C-IV; ECL; apo-CIV; apoC-IV; apolipoprotein C4; apolipoprotein CIV; apolipoprotein E-linked; apolipoprotein C2 linked;
Chromosome
1
Map Location
1q21
Summary
member of the apolipoprotein family; gene is closely linked to the apolipoprotein E gene [RGD, Feb 2006]
Orthologs
View orthologs and multiple alignments for Apoc4

Proteins

apolipoprotein C-IV precursor
Refseq ID NP_001102889
Protein GI 157821489
UniProt ID P55797
mRNA ID NM_001109419
Length 124
MSLLRCRQQTLPSLCLSVLFLACFVASMPTESLTPTPGPENSRWSLVRARVMEMVEPLVTRTRDRWRWFWGPRAIQGFVQTYYEDHLKDLGPRTQAWLQSSRDHLLNKTHSLCPRLLCRDWTQG
sig_peptide: 1..27 inference: COORDINATES: ab initio prediction:SignalP:4.0 calculated_mol_wt: 3001 peptide sequence: MSLLRCRQQTLPSLCLSVLFLACFVAS mat_peptide: 28..124 product: Apolipoprotein C-IV experiment: experimental evidence, no additional details recorded note: propagated from UniProtKB/Swiss-Prot (P55797.2) calculated_mol_wt: 11549 peptide sequence: MPTESLTPTPGPENSRWSLVRARVMEMVEPLVTRTRDRWRWFWGPRAIQGFVQTYYEDHLKDLGPRTQAWLQSSRDHLLNKTHSLCPRLLCRDWTQG

Gene Information

Entrez Gene ID
680551
Gene Name
apolipoprotein C-IV
Gene Symbol
Apoc4
Species
Rattus norvegicus

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0034364 IEA:Ensembl C high-density lipoprotein particle
GO:0034361 IEA:Ensembl C very-low-density lipoprotein particle
GO:0006869 IEA:UniProtKB-KW P lipid transport
GO:0010890 IEA:Ensembl P positive regulation of sequestering of triglyceride
GO:0070328 IEA:Ensembl P triglyceride homeostasis

Domain Information

InterPro Annotations

Accession Description
IPR028120 Apolipoprotein C-IV

UniProt Annotations

Entry Information

Gene Name
apolipoprotein C-IV
Protein Entry
APOC4_RAT
UniProt ID
P55797
Species
Rat

Comments

Comment Type Description
Alternative Products Event=Alternative splicing; Named isoforms=2; Name=1; IsoId=P55797-1; Sequence=Displayed; Note=No experimental confirmation available.; Name=2; IsoId=P55797-2; Sequence=VSP_022002; Note=No experimental confirmation available.;
Function May participate in lipoprotein metabolism.
Sequence Caution Sequence=CAA39653.1; Type=Erroneous translation; Note=Wrong choice of frame.; Evidence= ;
Similarity Belongs to the apolipoprotein C4 family
Subcellular Location Secreted.

Identical and Related Proteins

Unique RefSeq proteins for LMP013623 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
157821489 RefSeq NP_001102889 124 apolipoprotein C-IV precursor

Identical Sequences to LMP013623 proteins

Reference Database Accession Length Protein Name
GI:157821489 GenBank EDM08173.1 124 rCG54131 [Rattus norvegicus]
GI:157821489 SwissProt P55797.2 124 RecName: Full=Apolipoprotein C-IV; Short=Apo-CIV; Short=ApoC-IV; AltName: Full=Apolipoprotein C4; AltName: Full=Apolipoprotein E-linked; AltName: Full=ECL; Flags: Precursor [Rattus norvegicus]

Related Sequences to LMP013623 proteins

Reference Database Accession Length Protein Name
GI:157821489 GenBank AAH24657.1 124 Apolipoprotein C-IV [Mus musculus]
GI:157821489 GenBank EDM08173.1 124 rCG54131 [Rattus norvegicus]
GI:157821489 RefSeq NP_031411.1 124 apolipoprotein C-IV precursor [Mus musculus]
GI:157821489 SwissProt P55797.2 124 RecName: Full=Apolipoprotein C-IV; Short=Apo-CIV; Short=ApoC-IV; AltName: Full=Apolipoprotein C4; AltName: Full=Apolipoprotein E-linked; AltName: Full=ECL; Flags: Precursor [Rattus norvegicus]