Gene/Proteome Database (LMPD)
Proteins
| tenascin-R | |
|---|---|
| Refseq ID | NP_001247930 |
| Protein GI | 386781804 |
| UniProt ID | F6SEB7 |
| mRNA ID | NM_001261001 |
| Length | 1358 |
| Protein sequence is identical to GI:109019593 (mRNA isoform) | |
| Refseq ID | XP_001104570 |
| Protein GI | 109019593 |
| UniProt ID | F6SEB7 |
| mRNA ID | XM_001104570 |
| Length | 1358 |
| MGADGETVVLKNMLIGVNLILLGSMLKPSECQLEVTTERVQRQSVEEEGGIANYNTSSKEQPVVFNHVYNINVPLDSLCSSGLEASAEQDVSAEDETVAEYTGQTSDHESQVTFTHRINLPKKACPCASSAQMLQELLSRIEMLEREVSVLRDQCNANCCQESAATGQLDYIPHCSGHGNFSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCSSRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGRCANGTCLCEEGYVGEDCGQRQCLNACSGRGQCEEGLCICEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQPTALGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQGLQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQVPSDVTSFNQTGLKPGEEYIVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWIPPRAKVDFILLKYGLVGGEGGRTTFRLQPPLSQYSVQALRPGSRYEVSVSAVRGTNESDSATTQFTTEIDAPKNLRVGSRTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHEVLVPKGIGPTTRTTLTDLVPGTEYGVGISAIMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHLHFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMTEVSLDATKRHAVLMGLQPATEYIVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRPTQVGRLDSSVVPNTVTEFTITRLYPATEYEISLNSVRGREESERICTLVHTAMDNPVDLTATNITPTEALLQWKAPVGEVENYVIVLTHFAVAGETILVDGVSEEFRLVDLLPSTHYTATMYATNGPLTSGTISTNFSTLLDPPANLTASEVTRQSALISWQPPRAEIENYVLTYKSTDGSRKELIVDAEDTWIRLEGLLENTDYTVLLQAAQDTAWSSITSTAFTTGGRVFPHPQDCAQHLMNGDTLSGVYPIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFASYDRFSVEDNRNLYKLRIGSYNGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYSHRLMAGRKRQSLQF | |
Gene Information
Gene Ontology (GO Annotations)
| GO ID | Source | Type | Description |
|---|---|---|---|
| GO:0009986 | IEA:Ensembl | C | cell surface |
| GO:0005737 | IEA:Ensembl | C | cytoplasm |
| GO:0045121 | IEA:Ensembl | C | membrane raft |
| GO:0005634 | IEA:Ensembl | C | nucleus |
| GO:0072534 | IEA:Ensembl | C | perineuronal net |
| GO:0005578 | IEA:Ensembl | C | proteinaceous extracellular matrix |
| GO:0008306 | IEA:Ensembl | P | associative learning |
| GO:0030198 | IEA:Ensembl | P | extracellular matrix organization |
| GO:0035641 | IEA:Ensembl | P | locomotory exploration behavior |
| GO:0060291 | IEA:Ensembl | P | long-term synaptic potentiation |
| GO:0048692 | IEA:Ensembl | P | negative regulation of axon extension involved in regeneration |
| GO:0022408 | IEA:Ensembl | P | negative regulation of cell-cell adhesion |
| GO:0050805 | IEA:Ensembl | P | negative regulation of synaptic transmission |
| GO:0050885 | IEA:Ensembl | P | neuromuscular process controlling balance |
| GO:0007158 | IEA:Ensembl | P | neuron cell-cell adhesion |
| GO:0051968 | IEA:Ensembl | P | positive regulation of synaptic transmission, glutamatergic |
| GO:0051971 | IEA:Ensembl | P | positive regulation of transmission of nerve impulse |
| GO:0050808 | IEA:Ensembl | P | synapse organization |
| GO:0022029 | IEA:Ensembl | P | telencephalon cell migration |
KEGG Pathway Links
Domain Information
InterPro Annotations
| Accession | Description |
|---|---|
| IPR013111 | EGF-like domain, extracellular |
| IPR013032 | EGF-like, conserved site |
| IPR002181 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain |
| IPR014716 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 |
| IPR014715 | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2 |
| IPR003961 | Fibronectin type III |
| IPR013783 | Immunoglobulin-like fold |
UniProt Annotations
Entry Information
Identical and Related Proteins
Unique RefSeq proteins for LMP014974 (as displayed in Record Overview)
| Protein GI | Database | Accession | Length | Protein Name |
|---|---|---|---|---|
| 109019593 | RefSeq | XP_001104570 | 1358 | tenascin R |
Identical Sequences to LMP014974 proteins
| Reference | Database | Accession | Length | Protein Name |
|---|---|---|---|---|
| GI:386781804 | GenBank | EHH15840.1 | 1358 | hypothetical protein EGK_01991 [Macaca mulatta] |
| GI:386781804 | GenBank | AFE64903.1 | 1358 | tenascin-R precursor [Macaca mulatta] |
| GI:386781804 | RefSeq | XP_005540114.1 | 1358 | PREDICTED: tenascin-R isoform X1 [Macaca fascicularis] |
Related Sequences to LMP014974 proteins
| Reference | Database | Accession | Length | Protein Name |
|---|---|---|---|---|
| GI:386781804 | GenBank | EHH50832.1 | 1358 | hypothetical protein EGM_01717 [Macaca fascicularis] |