Structure Database (LMSD)
Common Name
13S-HODE
Systematic Name
13S-hydroxy-9Z,11E-octadecadienoic acid
Synonyms
- (9Z, 11E)-(13S)-13-Hydroxyoctadeca-9,11-dienoic acid
- 13-HODE
3D model of 13S-HODE
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Biological Context
13(S)-HODE is produced by incubation of linoleic acid with plant and mammalian lipoxygenases. It has been shown to inhibit the adhesion of tumor cells to the endothelium at concentrations around 1 µM,1,2 and down regulates the expression of the IRGpIIb/IIIa receptor.3
This information has been provided by Cayman Chemical
References
2. Buchanan, M.R., Haas, T.A., Lagarde, M., et al. 13-Hydroxyoctadecadienoic acid is the vessel wall chemorepellant factor, LOX. The Journal of Biological Chemisty 260(30), 16056-16059 (1985).
References
Taxonomy Information
Curated from
NCBI taxonomy class
Reference
Homo sapiens
(#9606)
Mammalia
(#40674)
Metabolism of oxidized linoleic acid by glutathione transferases: peroxidase activity toward 13-hydroperoxyoctadecadienoic acid.,
Biochim Biophys Acta, 2006
Biochim Biophys Acta, 2006
Pubmed ID:
16624487
Coriaria myrtifolia
(#3460)
Magnoliopsida
(#3398)
Structure and intraglyceride distribution of coriolic acid.,
Lipids, 1968
Lipids, 1968
Pubmed ID:
17805822
String Representations
InChiKey (Click to copy)
HNICUWMFWZBIFP-IRQZEAMPSA-N
InChi (Click to copy)
InChI=1S/C18H32O3/c1-2-3-11-14-17(19)15-12-9-7-5-4-6-8-10-13-16-18(20)21/h7,9,12,15,17,19H,2-6,8,10-11,13-14,16H2,1H3,(H,20,21)/b9-7-,15-12+/t17-/m0/s1
SMILES (Click to copy)
OC(=O)CCCCCCC/C=C\C=C\[C@@H](O)CCCCC
Other Databases
KEGG ID
HMDB ID
CHEBI ID
PubChem CID
PlantFA ID
SwissLipids ID
Cayman ID
PDB ID
Calculated Physicochemical Properties
Heavy Atoms
21
Rings
0
Aromatic Rings
0
Rotatable Bonds
14
Van der Waals Molecular Volume
338.41
Topological Polar Surface Area
57.53
Hydrogen Bond Donors
2
Hydrogen Bond Acceptors
3
logP
5.14
Molar Refractivity
88.90
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