Structure Database (LMSD)

Common Name
5-trans-PGF2alpha
Systematic Name
9S,11R,15S-trihydroxy-5E,13E-prostadienoic acid
Synonyms
  • 5-trans-Prostaglandin F2alpha
LM ID
LMFA03010077
Formula
C20H34O5
Exact Mass
Calculate m/z
354.240625
Sum Composition
FA 20:3;O3
Status
Active
Show lipids differing only in stereochemistry/bond geometry

Classification

Category
Main Class
Sub Class
Fatty Acyls [FA]
Eicosanoids [FA03]
Prostaglandins [FA0301]

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
synthetic construct (#32630)
Proceedings: The effects of some prostaglandins on respiration in the rabbit.,
J Pharm Pharmacol, 1974
Pubmed ID: 4156762

String Representations

InChiKey (Click to copy)
PXGPLTODNUVGFL-UAAPODJFSA-N
InChi (Click to copy)
InChI=1S/C20H34O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h4,7,12-13,15-19,21-23H,2-3,5-6,8-11,14H2,1H3,(H,24,25)/b7-4+,13-12+/t15-,16+,17+,18-,19+/m0/s1
SMILES (Click to copy)
[C@H]1(/C=C/[C@@H](O)CCCCC)[C@H](O)C[C@H](O)[C@@H]1C/C=C/CCCC(=O)O

Other Databases

CHEBI ID
187232
LIPIDBANK ID
XPR1759
PubChem CID
5283078
Cayman ID
16210

Calculated Physicochemical Properties

Heavy Atoms 25
Rings 1
Aromatic Rings 0
Rotatable Bonds 12
Van der Waals Molecular Volume 378.23
Topological Polar Surface Area 97.99
Hydrogen Bond Donors 4
Hydrogen Bond Acceptors 5
logP 3.90
Molar Refractivity 99.68

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Updated at
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