Structure Database (LMSD)
Common Name
1a,1b-dihomo-PGE2
Systematic Name
1a,1b-dihomo-9-oxo-11R,15S-dihydroxy-5Z,13E-prostadienoic acid
Synonyms
- 1a,1b-dihomo-Prostaglandin E2
LM ID
LMFA03010155
Formula
Exact Mass
Calculate m/z
380.256275
Sum Composition
Status
Curated
3D model of 1a,1b-dihomo-PGE2
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Biological Context
1a,1b-dihomo Prostaglandin E2 (1a,1b-dihomo PGE2) is a rare polyunsaturated fatty acid first identified in extracts of sheep vesicular gland microsomes, known to contain COX, incubated with adrenic acid .1 1a,1b-dihomo PGE2 has also been identified in conditioned media of RAW 264.7 macrophages stimulated with endotoxin and arachidonic acid (AA).2 This product is thought to be produced by elongation of AA to adrenic acid, which is then metabolized sequentially by COX and PGE synthase.2
This information has been provided by Cayman Chemical
References
1. Harkewicz, R., Fahy, E., Andreyev, A., et al. Arachidonate-derived dihomoprostaglandin production observed in endotoxin-stimulated macrophage-like cells. The Journal of Biological Chemisty 282(5), 2899-2910 (2007).
2. Tobias, L.D., Vane, F.M., and Paulsrud, J.R. The biosynthesis of 1a,1b-dihomo-PGE2 and 1a,1b-dihomo-PGF2a from 7,10,13,16-docosatetraenoic acid by an acetone-pentane powder of sheep vesicular gland microsomes. Prostaglandins 10(3), 443-468 (1975).
String Representations
InChiKey (Click to copy)
PNKJEXAWAIJTRO-QKIVIXBWSA-N
InChi (Click to copy)
InChI=1S/C22H36O5/c1-2-3-8-11-17(23)14-15-19-18(20(24)16-21(19)25)12-9-6-4-5-7-10-13-22(26)27/h6,9,14-15,17-19,21,23,25H,2-5,7-8,10-13,16H2,1H3,(H,26,27)/b9-6-,15-14+/t17-,18+,19+,21+/m0/s1
SMILES (Click to copy)
[C@H]1(/C=C/[C@@H](O)CCCCC)[C@H](O)CC(=O)[C@@H]1C/C=C\CCCCCC(O)=O
Other Databases
Calculated Physicochemical Properties
Heavy Atoms
27
Rings
1
Aromatic Rings
0
Rotatable Bonds
14
Van der Waals Molecular Volume
410.19
Topological Polar Surface Area
94.83
Hydrogen Bond Donors
3
Hydrogen Bond Acceptors
5
logP
4.60
Molar Refractivity
107.40
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Updated at
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