Structure Database (LMSD)

Common Name
1a,1b-dihomo-PGE2
Systematic Name
1a,1b-dihomo-9-oxo-11R,15S-dihydroxy-5Z,13E-prostadienoic acid
Synonyms
  • 1a,1b-dihomo-Prostaglandin E2
LM ID
LMFA03010155
Formula
Exact Mass
Calculate m/z
380.256275
Sum Composition
Status
Curated

Classification

Biological Context

1a,1b-dihomo Prostaglandin E2 (1a,1b-dihomo PGE2) is a rare polyunsaturated fatty acid first identified in extracts of sheep vesicular gland microsomes, known to contain COX, incubated with adrenic acid .1 1a,1b-dihomo PGE2 has also been identified in conditioned media of RAW 264.7 macrophages stimulated with endotoxin and arachidonic acid (AA).2 This product is thought to be produced by elongation of AA to adrenic acid, which is then metabolized sequentially by COX and PGE synthase.2

This information has been provided by Cayman Chemical

References

1. Harkewicz, R., Fahy, E., Andreyev, A., et al. Arachidonate-derived dihomoprostaglandin production observed in endotoxin-stimulated macrophage-like cells. The Journal of Biological Chemisty 282(5), 2899-2910 (2007).
2. Tobias, L.D., Vane, F.M., and Paulsrud, J.R. The biosynthesis of 1a,1b-dihomo-PGE2 and 1a,1b-dihomo-PGF2a from 7,10,13,16-docosatetraenoic acid by an acetone-pentane powder of sheep vesicular gland microsomes. Prostaglandins 10(3), 443-468 (1975).

String Representations

InChiKey (Click to copy)
PNKJEXAWAIJTRO-QKIVIXBWSA-N
InChi (Click to copy)
InChI=1S/C22H36O5/c1-2-3-8-11-17(23)14-15-19-18(20(24)16-21(19)25)12-9-6-4-5-7-10-13-22(26)27/h6,9,14-15,17-19,21,23,25H,2-5,7-8,10-13,16H2,1H3,(H,26,27)/b9-6-,15-14+/t17-,18+,19+,21+/m0/s1
SMILES (Click to copy)
[C@H]1(/C=C/[C@@H](O)CCCCC)[C@H](O)CC(=O)[C@@H]1C/C=C\CCCCCC(O)=O

Other Databases

CHEBI ID
PubChem CID
Cayman ID

Calculated Physicochemical Properties

Heavy Atoms 27
Rings 1
Aromatic Rings 0
Rotatable Bonds 14
Van der Waals Molecular Volume 410.19
Topological Polar Surface Area 94.83
Hydrogen Bond Donors 3
Hydrogen Bond Acceptors 5
logP 4.60
Molar Refractivity 107.40

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Updated at
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