Structure Database (LMSD)

Common Name
Daidzein
Systematic Name
4',7-Dihydroxyisoflavone
Synonyms
  • 7-Hydroxy-3-(4-hydroxyphenyl)chromen-4-one
  • Daidzeol
  • Isoaurostatin
LM ID
LMPK12050038
Formula
Exact Mass
Calculate m/z
254.05791
Status
Curated




Classification

Biological Context

Daidzein is an isoflavone phytoestrogenic compound that has been found in soybeans and other legumes.1 It binds to estrogen receptor β (ERβ; Ki = 2.8 µM) but not ERα at concentrations up to 1 mM.2 It is estrogenic in vitro, increasing gene transcription mediated by the estrogen response element (ERE) in a reporter assay in an ERβ-dependent manner (EC50 = 2.8 µM for MCF-7 cells expressing ERβ).1 Daidzein is an inhibitor of carbonic anhydrase (CA) that is selective for carbonic CAVII and CAXII (Kis = 4.2 and 56 nM, respectively) over CAI, II, and IV (Kis = >10,000, >10,000, and 718.7 nM, respectively).3 It reduces tumor growth in a PC3 prostate cancer mouse orthotopic model when administered at a dose of 50 mg/kg per day and potentiates the effects of radiation therapy.4

This information has been provided by Cayman Chemical

References

1. Zhao, L., and Brinton, R.D. Structure-based virtual screening for plant-based ERβ-selective ligands as potential preventative therapy against age-related neurodegenerative diseases. J. Med. Chem. 48(10), 3463-3466 (2005).
2. Harris, D.M., Besselink, E., Henning, S.M., et al. Phytoestrogens induce differential estrogen receptor alpha- or beta-mediated responses in transfected breast cancer cells. Exp. Biol. Med. (Maywood) 230(8), 558-568 (2005).

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Viridiplantae (#33090)
Flavonoid imported from http://metabolomics.jp/
Glycine max (#3847)
Magnoliopsida (#3398)
Identification and expression of isoflavone synthase, the key enzyme for biosynthesis of isoflavones in legumes.,
Nat Biotechnol, 2000
Pubmed ID: 10657130

String Representations

InChiKey (Click to copy)
ZQSIJRDFPHDXIC-UHFFFAOYSA-N
InChi (Click to copy)
InChI=1S/C15H10O4/c16-10-3-1-9(2-4-10)13-8-19-14-7-11(17)5-6-12(14)15(13)18/h1-8,16-17H
SMILES (Click to copy)
C1(O)=CC2OC=C(C3C=CC(O)=CC=3)C(=O)C=2C=C1

Other Databases

Wikipedia
KEGG ID
HMDB ID
CHEBI ID
METABOLOMICS ID
PubChem CID
Cayman ID
PDB ID
GuidePharm ID

Calculated Physicochemical Properties

Heavy Atoms 19
Rings 3
Aromatic Rings 3
Rotatable Bonds 1
Van der Waals Molecular Volume 212.32
Topological Polar Surface Area 70.67
Hydrogen Bond Donors 2
Hydrogen Bond Acceptors 4
logP 3.77
Molar Refractivity 71.36

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Created at
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Updated at
26th Dec 2024