Structure Database (LMSD)

Common Name
Cycloviolaxanthin
Systematic Name
(3S,5R,6R,3'S,5'R,6'R)-3,6:3',6'-Diepoxy-5,6,5',6'-tetrahydro-β,β-carotene-5,5'-diol
Synonyms
LM ID
LMPR01070063
Formula
C40H56O4
Exact Mass
Calculate m/z
600.41786
Status
Curated
Show lipids differing only in stereochemistry/bond geometry
View MassBank spectra
View NP-MRD ID(NMR) spectrum

Classification

Category
Main Class
Sub Class
Prenol Lipids [PR]
Isoprenoids [PR01]
C40 isoprenoids (tetraterpenes) [PR0107]

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Capsicum annuum (#4072)
Magnoliopsida (#3398)
Cycloviolaxanthin (= (3S,5R,6R,3′S,5′R,6′R)-3,6:3′,6′-Diepoxy-5,6,5′,6′-tetrahydro-β,β-carotin-5,5′-diol), ein neues Carotinoid aus Paprika (Capsicum annuum),
Helv Chim Acta, 1991
Corbicula japonica (#141464)
Bivalvia (#6544)
Carotenoids in three species of Corbicula Clams, Corbicula japonica, Corbicula sandai, and Corbicula sp. (Chinese Freshwater Corbicula Clam).,
J Agric Food Chem, 2005
Pubmed ID: 16218688

String Representations

InChiKey (Click to copy)
RZEVGLVRLUDYEA-AOXVFRMFSA-N
InChi (Click to copy)
InChI=1S/C40H56O4/c1-29(17-13-19-31(3)21-23-39-35(5,6)25-33(43-39)27-37(39,9)41)15-11-12-16-30(2)18-14-20-32(4)22-24-40-36(7,8)26-34(44-40)28-38(40,10)42/h11-24,33-34,41-42H,25-28H2,1-10H3/b12-11+,17-13+,18-14+,23-21+,24-22+,29-15+,30-16+,31-19+,32-20+/t33-,34-,37+,38+,39+,40+/m0/s1
SMILES (Click to copy)
C/C(=C\C=C\C=C(/C)\C=C\C=C(/C)\C=C\[C@@]12C(C)(C)C[C@@H](C[C@@]1(C)O)O2)/C=C/C=C(\C)/C=C/[C@@]12C(C)(C)C[C@@H](C[C@@]1(C)O)O2

Other Databases

LIPIDBANK ID
VCA0061
PubChem CID
16061210
Carotenoid ID
CA00418

Calculated Physicochemical Properties

Heavy Atoms 44
Rings 4
Aromatic Rings 0
Rotatable Bonds 10
Van der Waals Molecular Volume 662.52
Topological Polar Surface Area 63.06
Hydrogen Bond Donors 2
Hydrogen Bond Acceptors 4
logP 10.69
Molar Refractivity 186.29

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Created at
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Updated at
21st Nov 2025