Structure Database (LMSD)

Common Name
Diadinoxanthin
Systematic Name
(3S,5R,6S,3'R)-5,6-Epoxy-7',8'-didehydro-5,6-dihydro-β,β-caroten-3,3'-diol
Synonyms
  • Diadinoxanthin A
LM ID
LMPR01070719
Formula
C40H54O3
Exact Mass
Calculate m/z
582.407295
Status
Active
Show lipids differing only in stereochemistry/bond geometry

Classification

Category
Main Class
Sub Class
Prenol Lipids [PR]
Isoprenoids [PR01]
C40 isoprenoids (tetraterpenes) [PR0107]

References

Comments
Imported from http://carotenoiddb.jp/

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Corbicula (#45948)
Bivalvia (#6544)
Carotenoids in three species of Corbicula Clams, Corbicula japonica, Corbicula sandai, and Corbicula sp. (Chinese Freshwater Corbicula Clam).,
J Agric Food Chem, 2005
Pubmed ID: 16218688
Euglena viridis (#3040)
Euglenida (#3035)
Diacetylenic carotenoids from euglena viridis,
Phytochemistry, 1998
Amphidinium carterae (#2961)
Dinophyceae (#2864)
Carotenoids of the Dinophyceae,
Phytochemistry, 1974

String Representations

InChiKey (Click to copy)
OGHZCSINIMWCSB-GHIQLMQGSA-N
InChi (Click to copy)
InChI=1S/C40H54O3/c1-29(17-13-19-31(3)21-22-36-33(5)25-34(41)26-37(36,6)7)15-11-12-16-30(2)18-14-20-32(4)23-24-40-38(8,9)27-35(42)28-39(40,10)43-40/h11-20,23-24,34-35,41-42H,25-28H2,1-10H3/b12-11+,17-13+,18-14+,24-23+,29-15+,30-16+,31-19+,32-20+/t34-,35+,39-,40+/m1/s1
SMILES (Click to copy)
C1C(C)(C)[C@@]2(O[C@]2(C)C[C@H]1O)/C=C/C(/C)=C/C=C/C(/C)=C/C=C/C=C(\C)/C=C/C=C(\C)/C#CC1=C(C)C[C@@H](O)CC1(C)C

Other Databases

CHEBI ID
177613
PubChem CID
6449888
Carotenoid ID
CA00404

Calculated Physicochemical Properties

Heavy Atoms 43
Rings 3
Aromatic Rings
Rotatable Bonds 8
Van der Waals Molecular Volume 660.81
Topological Polar Surface Area 52.99
Hydrogen Bond Donors 2
Hydrogen Bond Acceptors 3
logP 10.35
Molar Refractivity 184.38

Admin

Created at
17th Nov 2021
Updated at
3rd Dec 2021