Structure Database (LMSD)
Common Name
Cer(d18:2(4E,8Z)/18:0(2OH[R]))
Systematic Name
N-(2R-hydroxyoctadecanoyl)-4E,8Z-octadecasphingadienine
Synonyms
- N-2-hydroxyoctadecanoyl-4,8-sphingadienine
LM ID
LMSP02010098
Formula
Exact Mass
Calculate m/z
579.522659
Sum Composition
Abbrev Chains
Cer 18:2;O2/18:0;O
Status
Active
3D model of Cer(d18:2(4E,8Z)/18:0(2OH[R]))
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
References
Taxonomy Information
Curated from
NCBI taxonomy class
Reference
Dracontium
(#174208)
Magnoliopsida
(#3398)
Qualitative on-line profiling of ceramides and cerebrosides by high performance liquid chromatography coupled with electrospray ionization ion trap tandem mass spectrometry: the case of Dracontium loretense.,
J Pharm Biomed Anal, 2011
J Pharm Biomed Anal, 2011
Pubmed ID:
21282027
String Representations
InChiKey (Click to copy)
FLDOHWSTFPNSFC-NDWAGTCRSA-N
InChi (Click to copy)
InChI=1S/C36H69NO4/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-35(40)36(41)37-33(32-38)34(39)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h20,22,28,30,33-35,38-40H,3-19,21,23-27,29,31-32H2,1-2H3,(H,37,41)/b22-20-,30-28+/t33-,34+,35+/m0/s1
SMILES (Click to copy)
[C@](CO)([H])(NC([C@H](O)CCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CC/C=C\CCCCCCCCC
Other Databases
Calculated Physicochemical Properties
Heavy Atoms
41
Rings
0
Aromatic Rings
0
Rotatable Bonds
31
Van der Waals Molecular Volume
669.60
Topological Polar Surface Area
89.79
Hydrogen Bond Donors
4
Hydrogen Bond Acceptors
5
logP
10.23
Molar Refractivity
178.11
Admin
Created at
-
Updated at
18th Mar 2021