Structure Database (LMSD)

OH H NH OH O OH H
Common Name
Cer(d18:2(4E,8Z)/18:0(2OH[R]))
Systematic Name
N-(2R-hydroxyoctadecanoyl)-4E,8Z-octadecasphingadienine
Synonyms
  • N-2-hydroxyoctadecanoyl-4,8-sphingadienine
LM ID
LMSP02010098
Formula
Exact Mass
Calculate m/z
579.522659
Sum Composition
Abbrev Chains
Cer 18:2;O2/18:0;O
Status
Active

Main

Classification

String Representations

InChiKey (Click to copy)
FLDOHWSTFPNSFC-NDWAGTCRSA-N
InChi (Click to copy)
InChI=1S/C36H69NO4/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-35(40)36(41)37-33(32-38)34(39)30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h20,22,28,30,33-35,38-40H,3-19,21,23-27,29,31-32H2,1-2H3,(H,37,41)/b22-20-,30-28+/t33-,34+,35+/m0/s1
SMILES (Click to copy)
[C@](CO)([H])(NC([C@H](O)CCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CC/C=C\CCCCCCCCC

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Dracontium (#174208)
Magnoliopsida (#3398)
Qualitative on-line profiling of ceramides and cerebrosides by high performance liquid chromatography coupled with electrospray ionization ion trap tandem mass spectrometry: the case of Dracontium loretense.,
J Pharm Biomed Anal, 2011
Pubmed ID: 21282027

Other Databases

PubChem CID

Calculated Physicochemical Properties

Heavy Atoms 41
Rings 0
Aromatic Rings 0
Rotatable Bonds 31
Van der Waals Molecular Volume 669.60
Topological Polar Surface Area 89.79
Hydrogen Bond Donors 4
Hydrogen Bond Acceptors 5
logP 10.23
Molar Refractivity 178.11

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Created at
-
Updated at
18th Mar 2021