Structure Database (LMSD)

Common Name
Cer(d18:0/36:0(36OH))
Systematic Name
N-(36-hydroxy-hexatriacontanoyl)-sphinganine
Synonyms
  • N-(36-hydroxy-hexatriacontanoyl)-dihydroceramide
  • N-(omega-hydroxy-hexatriacontanoyl)-dihydroceramide
  • Cer[ODS]
LM ID
LMSP02020048
Status
Active
Exact Mass
Calculate m/z
835.835659
Formula
C54H109NO4
Abbrev
Cer 54:0;O3
Abbrev Chains
Cer 18:0;O2/36:0;O
Show lipids differing only in stereochemistry/bond geometry
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MDLMOL SDF CSV TSV
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Main

Classification

Category
Main Class
Sub Class
Sphingolipids [SP]
Ceramides [SP02]
N-acylsphinganines (dihydroceramides) [SP0202]

String Representations

InChiKey (Click to copy)
FMCQPGHMQQBHKJ-SSGPOVAZSA-N
InChi (Click to copy)
InChI=1S/C54H109NO4/c1-2-3-4-5-6-7-8-30-33-36-39-42-45-48-53(58)52(51-57)55-54(59)49-46-43-40-37-34-31-28-26-24-22-20-18-16-14-12-10-9-11-13-15-17-19-21-23-25-27-29-32-35-38-41-44-47-50-56/h52-53,56-58H,2-51H2,1H3,(H,55,59)/t52-,53+/m0/s1
SMILES (Click to copy)
[C@](CO)([H])(NC(CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCO)=O)[C@]([H])(O)CCCCCCCCCCCCCCC

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Mus musculus (#10090)
Mammalia (#40674)
Comparative profiling and comprehensive quantification of stratum corneum ceramides in humans and mice by LC/MS/MS.,
J Lipid Res, 2020
Pubmed ID: 32265320

Calculated Physicochemical Properties

Heavy Atoms 59
Rings 0
Aromatic Rings 0
Rotatable Bonds 52
Van der Waals Molecular Volume 986.28
Topological Polar Surface Area 89.79
Hydrogen Bond Donors 4
Hydrogen Bond Acceptors 5
logP 17.70
Molar Refractivity 261.40

Reactions

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Admin

Created at
24th Apr 2020
Updated at
24th Apr 2020