Structure Database (LMSD)

Common Name
Cer(t18:0/25:0(2OH))
Systematic Name
N-(2-hydroxypentacosanoyl)-4R-hydroxysphinganine
Synonyms
  • N-(2-hydroxypentacosanoyl)-hydroxysphinganine
  • Cer[AP]
LM ID
LMSP02030068
Status
Active
Exact Mass
Calculate m/z
697.658424
Formula
Abbrev
Abbrev Chains
Cer 18:0;O3/25:0;O


Download as...
MDLMOL SDF CSV TSV
MDLMOL files can be opened in various drawing programs. In ChemDraw, open as filetype "MDL Molfile".

Main

Classification

String Representations

InChiKey (Click to copy)
YADUGDLSXPPFIP-DGJMNPOFSA-N
InChi (Click to copy)
InChI=1S/C43H87NO5/c1-3-5-7-9-11-13-15-17-18-19-20-21-22-23-24-25-27-29-31-33-35-37-41(47)43(49)44-39(38-45)42(48)40(46)36-34-32-30-28-26-16-14-12-10-8-6-4-2/h39-42,45-48H,3-38H2,1-2H3,(H,44,49)/t39-,40+,41?,42-/m0/s1
SMILES (Click to copy)
[C@](CO)([H])(NC(C(O)CCCCCCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)[C@H](O)CCCCCCCCCCCCCC

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Homo sapiens (#9606)
Mammalia (#40674)
Comparative profiling and comprehensive quantification of stratum corneum ceramides in humans and mice by LC/MS/MS.,
J Lipid Res, 2020
Pubmed ID: 32265320

Other Databases

PubChem CID

Calculated Physicochemical Properties

Heavy Atoms 49
Rings 0
Aromatic Rings 0
Rotatable Bonds 40
Van der Waals Molecular Volume 804.77
Topological Polar Surface Area 110.02
Hydrogen Bond Donors 5
Hydrogen Bond Acceptors 6
logP 12.67
Molar Refractivity 212.52

Admin

Created at
7th May 2020
Updated at
7th May 2020