Structure Database (LMSD)
Common Name
GlcCer(d18:2(4E,8Z)/16:0(2OH[S]))
Systematic Name
N-(2R-hydroxyhexadecanoyl)-1-β-glucosyl-4E,8Z-sphingadienine
Synonyms
- GlcCer(d18:2(4E,8Z)/16:0(2OH[S]))
- 1-O-beta-D-glucopyranosyl-(2S,3R,4E,8Z)-2-[(2R)-2-hydroxyhexadecanoylamino]-4,8-octadecadiene-1,3-diol
LM ID
LMSP05010087
Formula
Exact Mass
Calculate m/z
713.544184
Sum Composition
Abbrev Chains
GlcCer 18:2;O2/16:0;O
Status
Active
3D model of GlcCer(d18:2(4E,8Z)/16:0(2OH[S]))
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
References
String Representations
InChiKey (Click to copy)
HOMYIYLRRDTKAA-GMZRZXGTSA-N
InChi (Click to copy)
InChI=1S/C40H75NO9/c1-3-5-7-9-11-13-15-17-19-20-22-24-26-28-33(43)32(31-49-40-38(47)37(46)36(45)35(30-42)50-40)41-39(48)34(44)29-27-25-23-21-18-16-14-12-10-8-6-4-2/h19-20,26,28,32-38,40,42-47H,3-18,21-25,27,29-31H2,1-2H3,(H,41,48)/b20-19-,28-26+/t32-,33+,34-,35+,36+,37-,38+,40+/m0/s1
SMILES (Click to copy)
[C@](CO[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](CO)O1)([H])(NC([C@@H](O)CCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CC/C=C\CCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
50
Rings
1
Aromatic Rings
0
Rotatable Bonds
32
Van der Waals Molecular Volume
770.39
Topological Polar Surface Area
171.01
Hydrogen Bond Donors
7
Hydrogen Bond Acceptors
10
logP
8.99
Molar Refractivity
204.56
Admin
Created at
13th Mar 2020
Updated at
1st Feb 2021