Structure Database (LMSD)

Systematic Name
N-(2R-hydroxy-octadecanoyl)-1-β-D-glucosyl-9-methyl-sphing-4E,8E,10E-trienine
Synonyms
LM ID
LMSP05010172
Formula
C43H79NO9
Exact Mass
Calculate m/z
753.575484
Sum Composition
HexCer 37:3;O3
Abbrev Chains
GlcCer 19:3;O2/18:0;O
Status
Active
Show lipids differing only in stereochemistry/bond geometry

Main

Classification

Category
Main Class
Sub Class
Sphingolipids [SP]
Neutral glycosphingolipids [SP05]
Simple Glc series [SP0501]

String Representations

InChiKey (Click to copy)
ZVUJGVPZCOYKGX-XYSYECETSA-N
InChi (Click to copy)
InChI=1S/C43H79NO9/c1-4-6-8-10-12-13-14-15-16-17-18-20-22-26-31-37(47)42(51)44-35(33-52-43-41(50)40(49)39(48)38(32-45)53-43)36(46)30-27-23-25-29-34(3)28-24-21-19-11-9-7-5-2/h24,27-30,35-41,43,45-50H,4-23,25-26,31-33H2,1-3H3,(H,44,51)/b28-24+,30-27+,34-29+/t35-,36+,37+,38+,39+,40-,41+,43+/m0/s1
SMILES (Click to copy)
C([C@H](NC([C@H](O)CCCCCCCCCCCCCCCC)=O)[C@H](O)/C=C/CC/C=C(\C)/C=C/CCCCCCC)O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](CO)O1

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Cosmasterias lurida (#466981)
Asteroidea (#7588)
Isolation and structure of glucosylceramides from the starfish Cosmasterias lurida.,
Lipids, 1998
Pubmed ID: 9727615

Other Databases

PubChem CID
10395307

Calculated Physicochemical Properties

Heavy Atoms 53
Rings 1
Aromatic Rings
Rotatable Bonds 33
Van der Waals Molecular Volume 819.65
Topological Polar Surface Area 171.01
Hydrogen Bond Donors 7
Hydrogen Bond Acceptors 10
logP 9.94
Molar Refractivity 218.32

Admin

Created at
13th Jul 2021
Updated at
13th Jul 2021