Structure Database (LMSD)

Systematic Name
GalNAcβ1-3Galα1-3Galα1-3Galα1-4Galβ1-4Glcβ-Cer(d18:1/26:0)
Synonyms
LM ID
LMSP0502AQ06
Formula
C82H150N2O33
Exact Mass
Calculate m/z
1691.012093
Sum Composition
Hex(5)-HexNAc-Cer 44:1;O2
Status
Active (generated by computational methods)
Show lipids differing only in stereochemistry/bond geometry

Classification

Category
Main Class
Sub Class
Sphingolipids [SP]
Neutral glycosphingolipids [SP05]
Galalpha1-4Galbeta1-4Glc- (Globo series) [SP0502]

String Representations

InChiKey (Click to copy)
CTRURFDKSMRXNK-ZXVGVQABSA-N
InChi (Click to copy)
InChI=1S/C82H150N2O33/c1-4-6-8-10-12-14-16-18-19-20-21-22-23-24-25-26-27-29-31-33-35-37-39-41-58(93)84-50(51(92)40-38-36-34-32-30-28-17-15-13-11-9-7-5-2)48-106-78-67(101)65(99)72(56(46-89)111-78)113-79-68(102)66(100)73(57(47-90)112-79)114-80-70(104)75(62(96)54(44-87)108-80)116-82-71(105)76(63(97)55(45-88)110-82)117-81-69(103)74(61(95)53(43-86)109-81)115-77-59(83-49(3)91)64(98)60(94)52(42-85)107-77/h38,40,50-57,59-82,85-90,92,94-105H,4-37,39,41-48H2,1-3H3,(H,83,91)(H,84,93)/b40-38+/t50-,51+,52+,53+,54+,55+,56+,57+,59+,60-,61-,62-,63-,64+,65+,66+,67+,68+,69+,70+,71+,72+,73-,74-,75-,76-,77-,78+,79-,80+,81+,82+/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@H]3O[C@H](CO)[C@H](O)[C@H](O[C@H]4O[C@H](CO)[C@H](O)[C@H](O[C@H]5O[C@H](CO)[C@H](O)[C@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O)[C@H]6NC(=O)C)[C@H]5O)[C@H]4O)[C@H]3O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC

Other Databases

PubChem CID
44260297

Calculated Physicochemical Properties

Heavy Atoms 117
Rings 6
Aromatic Rings 0
Rotatable Bonds 59
Van der Waals Molecular Volume 1657.15
Topological Polar Surface Area 565.75
Hydrogen Bond Donors 21
Hydrogen Bond Acceptors 33
logP 11.71
Molar Refractivity 438.94

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Created at
-
Updated at
26th Jul 2021