Structure Database (LMSD)
Common Name
type I A antigen(d18:1/22:0)
Systematic Name
GalNAcα1-3(Fucα1-2)Galβ1-3GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/22:0)
Synonyms
LM ID
LMSP0504AF04
Formula
Exact Mass
Calculate m/z
1659.981127
Sum Composition
Status
Active (generated by computational methods)
3D model of type I A antigen(d18:1/22:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
Reactions
Filter by species:
ⓘ
Reactions are shown if the E.C. number of the enzyme catalysing it is annotated in the UniProt database for a species belonging to the selected taxonomic class.
Click on an edge to display the reaction(s).
String Representations
InChiKey (Click to copy)
GDZFUVJYZKWLQG-QIAOZXTCSA-N
InChi (Click to copy)
InChI=1S/C80H145N3O32/c1-6-8-10-12-14-16-18-20-21-22-23-24-25-27-29-31-33-35-37-39-56(92)83-49(50(91)38-36-34-32-30-28-26-19-17-15-13-11-9-7-2)45-104-77-68(102)66(100)70(55(44-88)110-77)111-79-69(103)72(62(96)53(42-86)108-79)113-76-58(82-48(5)90)71(61(95)52(41-85)107-76)112-80-74(115-78-67(101)65(99)59(93)46(3)105-78)73(63(97)54(43-87)109-80)114-75-57(81-47(4)89)64(98)60(94)51(40-84)106-75/h36,38,46,49-55,57-80,84-88,91,93-103H,6-35,37,39-45H2,1-5H3,(H,81,89)(H,82,90)(H,83,92)/b38-36+/t46-,49+,50-,51-,52-,53-,54-,55-,57-,58-,59-,60+,61-,62+,63+,64-,65-,66-,67+,68-,69-,70-,71-,72+,73+,74-,75-,76+,77-,78-,79+,80+/m1/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@H]5O[C@H](CO)[C@H](O)[C@H](O)[C@H]5NC(=O)C)[C@H]4O[C@H]4O[C@H](C)[C@@H](O)[C@@H](O)[C@@H]4O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
115
Rings
6
Aromatic Rings
0
Rotatable Bonds
55
Van der Waals Molecular Volume
1622.12
Topological Polar Surface Area
554.39
Hydrogen Bond Donors
20
Hydrogen Bond Acceptors
32
logP
11.04
Molar Refractivity
430.16
Admin
Created at
-
Updated at
26th Jul 2021