Structure Database (LMSD)
Common Name
type II antigen(d18:1/16:0)
Systematic Name
Fucα1-2Galβ1-4GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/16:0)
Synonyms
LM ID
LMSP0505AD01
Formula
Exact Mass
Calculate m/z
1372.807853
Sum Composition
Status
Active (generated by computational methods)
3D model of type II antigen(d18:1/16:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Main
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
NYYMMCHJDVDHNN-RWQWFTLCSA-N
InChi (Click to copy)
InChI=1S/C66H120N2O27/c1-5-7-9-11-13-15-17-19-21-23-25-27-29-31-41(74)40(68-46(75)32-30-28-26-24-22-20-18-16-14-12-10-8-6-2)37-86-63-56(84)54(82)59(45(36-72)91-63)92-65-57(85)60(50(78)43(34-70)88-65)94-62-47(67-39(4)73)51(79)58(44(35-71)90-62)93-66-61(53(81)49(77)42(33-69)89-66)95-64-55(83)52(80)48(76)38(3)87-64/h29,31,38,40-45,47-66,69-72,74,76-85H,5-28,30,32-37H2,1-4H3,(H,67,73)(H,68,75)/b31-29+/t38-,40+,41-,42-,43-,44-,45-,47-,48-,49+,50+,51-,52-,53+,54-,55+,56-,57-,58-,59-,60+,61-,62+,63-,64-,65+,66+/m1/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O[C@H]4O[C@H](C)[C@@H](O)[C@@H](O)[C@@H]4O)[C@H](O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
References
Calculated Physicochemical Properties
Heavy Atoms
95
Rings
5
Aromatic Rings
0
Rotatable Bonds
45
Van der Waals Molecular Volume
1339.97
Topological Polar Surface Area
464.30
Hydrogen Bond Donors
17
Hydrogen Bond Acceptors
27
logP
9.01
Molar Refractivity
355.18
Reactions
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Admin
Created at
-
Updated at
26th Jul 2021