Structure Database (LMSD)
Common Name
type II B antigen(d18:1/24:1(15Z))
Systematic Name
Galα1-3(Fucα1-2)Galβ1-4GlcNAcβ1-3Galβ1-4GlcNAcβ1-3Galβ1-4Glcβ-Cer(d18:1/24:1(15Z))
Synonyms
LM ID
LMSP0505AO07
Formula
Exact Mass
Calculate m/z
2010.102427
Sum Composition
Status
Active (generated by computational methods)
3D model of type II B antigen(d18:1/24:1(15Z))
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
String Representations
InChiKey (Click to copy)
BANNLLJKEDRTMO-KKVYVSARSA-N
InChi (Click to copy)
InChI=1S/C94H167N3O42/c1-6-8-10-12-14-16-18-20-21-22-23-24-25-26-27-29-31-33-35-37-39-41-62(108)97-53(54(107)40-38-36-34-32-30-28-19-17-15-13-11-9-7-2)49-124-89-77(121)74(118)82(61(48-104)132-89)134-93-79(123)84(68(112)57(44-100)128-93)137-87-63(95-51(4)105)70(114)80(59(46-102)130-87)133-92-78(122)83(67(111)56(43-99)127-92)136-88-64(96-52(5)106)71(115)81(60(47-103)131-88)135-94-86(139-90-75(119)72(116)65(109)50(3)125-90)85(69(113)58(45-101)129-94)138-91-76(120)73(117)66(110)55(42-98)126-91/h20-21,38,40,50,53-61,63-94,98-104,107,109-123H,6-19,22-37,39,41-49H2,1-5H3,(H,95,105)(H,96,106)(H,97,108)/b21-20-,40-38+/t50-,53+,54-,55-,56-,57-,58-,59-,60-,61-,63-,64-,65-,66+,67+,68+,69+,70-,71-,72-,73+,74-,75+,76-,77-,78-,79-,80-,81-,82-,83+,84+,85+,86-,87+,88+,89-,90-,91-,92+,93+,94+/m1/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@@H]5O[C@H](CO)[C@@H](O[C@@H]6O[C@H](CO)[C@H](O)[C@H](O[C@H]7O[C@H](CO)[C@H](O)[C@H](O)[C@H]7O)[C@H]6O[C@H]6O[C@H](C)[C@@H](O)[C@@H](O)[C@@H]6O)[C@H](O)[C@H]5NC(=O)C)[C@H]4O)[C@H](O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCC/C=C\CCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
139
Rings
8
Aromatic Rings
0
Rotatable Bonds
62
Van der Waals Molecular Volume
1924.86
Topological Polar Surface Area
716.83
Hydrogen Bond Donors
26
Hydrogen Bond Acceptors
42
logP
10.68
Molar Refractivity
510.67
Admin
Created at
-
Updated at
26th Jul 2021